ggKbase home page

cn_combo_scaffold_55_8

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 5858..6436

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2P878_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 192.0
  • Bit_score: 391
  • Evalue 6.40e-106
Cold shock protein {ECO:0000313|EMBL:EKF57163.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 192.0
  • Bit_score: 391
  • Evalue 9.00e-106
Transcriptional regulator cold shock protein similarity KEGG
DB: KEGG
  • Identity: 91.1
  • Coverage: 192.0
  • Bit_score: 363
  • Evalue 4.00e-98
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium albertimagni → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGGCGGACAGGATATCATCGAAGGGGCTCGGCGAGTTCGAAGAGCTGTCCGGAGAAGCCGTAGACCTGATCGAGATCACCGGCGTCGTCAAATGGTTCGACGTCGCCAAGGGTTTCGGCTTCATCGTTCCCGACAACGGCATGCAGGATGTCCTCCTGCACGTGACCTGCCTGCGCCGTGACGGCTACCAGACCATTCTCGAAGGCACGCGTATTGTGGCGCTCATCCAGAAGCGCGATCGCGGTTACCAGGCCTTCCGCATACTGTCGATGGACCAGTCGACCGCGATCCATCCGTCGCAGATGCCGCCGGTCCGCACCCATGTTCAGGTCACCCCAACCAGCGGGCTTGAGCGCGCTTTGGTCAAGTGGTTCAACCGTACCAAGGGCTTCGGCTTCTTGACCCGCGGCGAGGGCACGGAAGACATCTTCGTGCATATGGAAACCCTTCGCCGGTTCGGCCTGACCGAACTCCGTCCGGGGCAGACAGTGCTCGTGCGCTTCGGACCCGGAGACAAGGGGCTGATGGCGGCGGAAATCCATCCGGACAATCCCGGCCCCGCAGCGCGGGCGCATTGA
PROTEIN sequence
Length: 193
MADRISSKGLGEFEELSGEAVDLIEITGVVKWFDVAKGFGFIVPDNGMQDVLLHVTCLRRDGYQTILEGTRIVALIQKRDRGYQAFRILSMDQSTAIHPSQMPPVRTHVQVTPTSGLERALVKWFNRTKGFGFLTRGEGTEDIFVHMETLRRFGLTELRPGQTVLVRFGPGDKGLMAAEIHPDNPGPAARAH*