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cn_combo_scaffold_111_27

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(27101..27325)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PHK6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 74.0
  • Bit_score: 138
  • Evalue 2.90e-30
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 74.0
  • Bit_score: 138
  • Evalue 4.10e-30
rpoH; RNA polymerase factor sigma-32 similarity KEGG
DB: KEGG
  • Identity: 94.6
  • Coverage: 74.0
  • Bit_score: 133
  • Evalue 2.00e-29

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Taxonomy

Agrobacterium albertimagni → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 225
ATGCTGAAGCGGGCCATGAGCGTGTTGAACGACCGGGAACGTCGCATCTTCGAAGCACGCCGCCTCGCAGAGGATCCGGTCACGCTGGAAGAACTCTCCACCGAGTTCGACATCAGCCGCGAACGCGTCCGCCAGATCGAGGTCCGCGCCTTCGAAAAGGTCCAGGAAGCCGTCCAGAAGGACGCCCTGGAGCGCGCCAAGGCCTTGCGCGTGGTCGAGGCTTAA
PROTEIN sequence
Length: 75
MLKRAMSVLNDRERRIFEARRLAEDPVTLEELSTEFDISRERVRQIEVRAFEKVQEAVQKDALERAKALRVVEA*