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cn_combo_scaffold_111_28

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(27358..27954)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FBA0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 188.0
  • Bit_score: 371
  • Evalue 4.20e-100
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 188.0
  • Bit_score: 371
  • Evalue 5.80e-100
rpoH; RNA polymerase factor sigma-32 similarity KEGG
DB: KEGG
  • Identity: 97.9
  • Coverage: 188.0
  • Bit_score: 366
  • Evalue 4.90e-99

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Taxonomy

Rhizobium sp. PDO1-076 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGGCCCGCAGCAGTTTGCCATCGATCACAGCCGGAGAAGCCGGCCTCAACCGTTACCTGGACGAGATCCGCAAGTTCCCGATGCTGGAACCCCAGGAAGAATACATGCTTGCCAAGCGTTATGCCGAGCACGGCGACCGCGACGCGGCGCACCGGATGGTCACGAGCCACCTGCGCCTGGTTGCGAAGATTGCCATGGGCTATCGCGGCTACGGCCTGCCGATCGGCGAAGTCGTCTCGGAAGGCAATGTCGGCCTGATGCAGGCCGTCAAGAAGTTCGACCCCGAGCGTGGCTTCCGCCTGGCGACCTATGCCATGTGGTGGATCAAGGCCTCGATCCAGGAATACATCCTGCGCTCCTGGTCGCTGGTTAAGATGGGCACGACCGCCAACCAGAAACGCCTGTTCTTCAACCTGCGCCGCCTCAAGGGCAAGATCCAGGCAATCGAGGAAGGCGACCTGAAGCCCGACCAGGTCACCGAGATCGCGACCAAGCTGAAGGTGTCCGAGGAGGAGGTCATTTCGATGAACCGCCGCCTCTCCGGTGACGCATCGCTGAATGCACGGACGACCACGAGAGCCAGGAAGCCGTCCTGA
PROTEIN sequence
Length: 199
MARSSLPSITAGEAGLNRYLDEIRKFPMLEPQEEYMLAKRYAEHGDRDAAHRMVTSHLRLVAKIAMGYRGYGLPIGEVVSEGNVGLMQAVKKFDPERGFRLATYAMWWIKASIQEYILRSWSLVKMGTTANQKRLFFNLRRLKGKIQAIEEGDLKPDQVTEIATKLKVSEEEVISMNRRLSGDASLNARTTTRARKPS*