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cn_combo_scaffold_145_42

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(39592..40293)

Top 3 Functional Annotations

Value Algorithm Source
Two component response regulator n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q498_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 233.0
  • Bit_score: 455
  • Evalue 2.60e-125
Two component response regulator {ECO:0000313|EMBL:EKF60010.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobact similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 233.0
  • Bit_score: 454
  • Evalue 1.10e-124
petR; two component response regulator similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 231.0
  • Bit_score: 394
  • Evalue 2.60e-107
  • rbh

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Taxonomy

Agrobacterium albertimagni → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
GTGTCGAAGAAGATCGAGCTGACCGACGACGCCCCGCATCTCCTGGTGGTTGACGACGACACGCGTATTCGCGACCTCTTGCATCGGTTCCTCACGGAAAAAGGCTTCCGCGTCTCCGTCGCAGCCGATGCCGCAGAGGCACGCCGCAAGCTTGAAGGCCTGAGCTTCGATCTTCTCGTCCTCGACGTGATGATGCCGGGCGAATCCGGTCTTTCTCTCACCCAGAGCCTGTCCGACGAGAAGCGCGTGCCGGTCATTCTGCTGACCGCCCGCTCCGAGGCCGATAGCCGCATTGCCGGTCTGGAGGCCGGTGCGGACGACTATCTTGCCAAACCTTTCGATCCGCGCGAACTGGTGCTCAGGATCAACAATATTCTCAAGCGCAACATGAACCCCGATGCGCCGAAGATCGAGCAGGTGATGTTCGGTCCCTACACCTTCTCGGTGCTGCGCAAGGAACTACGCAAAGGCGCGGAAGTCATCCGTCTGACCGACCGCGAACAGGAAATCATGTATCTCTTCGCCACGCGAGCCGGCGACACGATCCCGCGCCACGAACTCGTCGGCAACGACGCGGAGGTCGGCGAGCGCACGATCGACGTCCAGATCAATCGCCTGCGGCGCAAGATCGAGGATGATCCCGCCAACCCCGTCTGGCTGCAGACGGTGCGCGGCATCGGTTATCGCCTCAGCATGGATTGA
PROTEIN sequence
Length: 234
VSKKIELTDDAPHLLVVDDDTRIRDLLHRFLTEKGFRVSVAADAAEARRKLEGLSFDLLVLDVMMPGESGLSLTQSLSDEKRVPVILLTARSEADSRIAGLEAGADDYLAKPFDPRELVLRINNILKRNMNPDAPKIEQVMFGPYTFSVLRKELRKGAEVIRLTDREQEIMYLFATRAGDTIPRHELVGNDAEVGERTIDVQINRLRRKIEDDPANPVWLQTVRGIGYRLSMD*