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cn_combo_scaffold_155_5

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(5366..6883)

Top 3 Functional Annotations

Value Algorithm Source
Sigma 54 dependent transcriptional activator n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q511_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 505.0
  • Bit_score: 944
  • Evalue 4.00e-272
Sigma 54 dependent transcriptional activator {ECO:0000313|EMBL:EKF58774.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium gro similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 505.0
  • Bit_score: 943
  • Evalue 1.20e-271
sigma 54 dependent transcriptional activator similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 525.0
  • Bit_score: 550
  • Evalue 3.60e-154

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Taxonomy

Agrobacterium albertimagni → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1518
TTGACCGCACAGATTCTACTCATCGATGAAGATGCCGCCGAGCGCCGCAGCATGAAGGCTGCGATCGAAGCGCACGGCCATGCCGTTCATGTCGCCGACACCGCGCCTGCGGGTGTCGAACTCTTCCGCCGTCACGCCGAGCAGATCGGTGTCGTGGTGCTGGACGTGACAGCCGCAGACGGCCTAAATCCCAGCGTCATCCCGATGCTTGCCGAGATCAATGTGGGCGTGCCTGTCATTGTCTGTACGACGGAAGGCGCAACCGAAACCGCGCTCAACGCCGTGCGTGCGGGTGCTTTCGACTTCCTCGTCAAGCCGATCGCCCAGGAGCGGCTGATCGGCGCGATCGAATCGGCATTGAAGATCCATCGCACCAGCCAGCAGGGCCGTACGCCGCGCCGGGCCCGGAGCGGTTCGGTCAGCTTTTCCGACGTCGTTGCGGCCAGTGCGGCCATGTCTCGCGTCGTGGAGCTCGGCCGCCGTGCAGCACAATCGATGATCCCCGTGATGCTCGAAGGCGAAGCAGGCGTCGGCAAGGAGCTCGTGGCACGCGCCATCCATGCCGCCAGCGATCGGTCGTCCCGTCCCTTCGTTTCGGTCAATTGCAATGCCATCACGCCTGCGCAGATCGAAGACGTGCTGTTCGGCAGCGAAACCCAGATGGGCAAGGTCGCCGAGGCGGAAGGAGGCACGCTCTTCATCGAGGAAATCAGCGAGTTGCCACCGGTCGGCCAGATGCGCCTGCTTGAAGTCGTCCAGTCCGGCGAGGTGCATCGTAGCGGACAGGCGAAGCCCTTGAAGGCCAATGTGCGGCTGGTTCTGGCGACCAACAAGGATCTGATCGAGGAGGTCAAGGCCGGACGTTTCCGCGAGGACCTCTATTACCGCGTCAACGTCTTCCCGATCACCATTGCAGCCCTGCGGCGCCGCAAGGAGGATATCCCGCATCTGATCCGGGCCTTTGTCGAGCGCTTTTCGCTCGAGCAGCGCCTGCCGCGGACCCTGCAGATCGAATCCTCCGCACTTGCCCTGCTGACTTCCTTCGACTGGCCCGGCAATACGAGGCAGCTCGAGAACGCGATCTTCCGCGCTGTTGTTCTGGCCGAGGGCACAAGCCTCAAGGAAAGCGAATTCCCGCAGATTGTAGCGCAGGTCACCAGTCATCGAGGCGCGACTGTCGGCAGCGAGGCGCAGGCCGCTGTGTATGAGCCGAGCCCGATCGCCAAGGTTCAGGCCGCTCTTGCCGAGCGTGCAGCAAGCTTCAGCGGCGGTCCGTCGGCTCCATCCACAGGTTTCAATGGGTCGGCCTCCGGCAATGTCATCGTCAGTACCGACGAGGCCGGCAATGTGCGCAAGCTGGCGGAGATCGAGGAGGAACTGATCCGCTTCGCGCTGAAGTTCTATCGGGGCCAGATGAGCCAGGTCGCCCGAAAGCTCGGTATCGGGCGGTCGACGCTCTACCGCAAGCTCAAGGATTACGGAATCGATCCCGACGATCCGCAGAAGGACGCTGCTTGA
PROTEIN sequence
Length: 506
LTAQILLIDEDAAERRSMKAAIEAHGHAVHVADTAPAGVELFRRHAEQIGVVVLDVTAADGLNPSVIPMLAEINVGVPVIVCTTEGATETALNAVRAGAFDFLVKPIAQERLIGAIESALKIHRTSQQGRTPRRARSGSVSFSDVVAASAAMSRVVELGRRAAQSMIPVMLEGEAGVGKELVARAIHAASDRSSRPFVSVNCNAITPAQIEDVLFGSETQMGKVAEAEGGTLFIEEISELPPVGQMRLLEVVQSGEVHRSGQAKPLKANVRLVLATNKDLIEEVKAGRFREDLYYRVNVFPITIAALRRRKEDIPHLIRAFVERFSLEQRLPRTLQIESSALALLTSFDWPGNTRQLENAIFRAVVLAEGTSLKESEFPQIVAQVTSHRGATVGSEAQAAVYEPSPIAKVQAALAERAASFSGGPSAPSTGFNGSASGNVIVSTDEAGNVRKLAEIEEELIRFALKFYRGQMSQVARKLGIGRSTLYRKLKDYGIDPDDPQKDAA*