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cn_combo_scaffold_155_27

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(31833..32228)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 131.0
  • Bit_score: 240
  • Evalue 1.80e-60
transcriptional regulator n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002625476 similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 131.0
  • Bit_score: 139
  • Evalue 2.30e-30
vapC; Probable ribonuclease VapC similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 131.0
  • Bit_score: 240
  • Evalue 3.50e-61

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Taxonomy

Neorhizobium galegae → Neorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 396
ATGCGGTACATGCTCGATACCAACATCGTTTCGGCGATTGTGAGGGATCCGCGTGGAAAGGTGCTCGAACGGCTTCTCGAGGTTGGCGAGGAGAACGCCTTCATCAGCATCATCACCCATGGTGAGATCTGGTACGGCGTGAAGAAGAATGGCTCCGAGGAGCTATCACAGAAGGTGTCGGCGGTAACGCGGCGCCTCTATGTGGCGCCCCTTCAACTGCCAACAGACCAACGGTATGCCGATGTCCGGCTGGCGCTGCGGCAGGGCAAGAATATCGGTCCAAATGACCTTTGGATCGCGGCACATGCGCTGGTGCTGGACGCTGTGCTGGTGACGAACAACGAAAGTGAGTTTTCCCGGGTCCCGGGATTGCAGATCGAGAACTGGCTGCGATAG
PROTEIN sequence
Length: 132
MRYMLDTNIVSAIVRDPRGKVLERLLEVGEENAFISIITHGEIWYGVKKNGSEELSQKVSAVTRRLYVAPLQLPTDQRYADVRLALRQGKNIGPNDLWIAAHALVLDAVLVTNNESEFSRVPGLQIENWLR*