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cn_combo_scaffold_331_28

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 26585..28291

Top 3 Functional Annotations

Value Algorithm Source
Putative oligopeptide-binding protein appA precursor (ABC superfamily) (EC:3.6.3.24) similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 569.0
  • Bit_score: 912
  • Evalue 5.30e-263
  • rbh
Oligopeptide transport system substrate binding protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QD31_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 568.0
  • Bit_score: 1149
  • Evalue 0.0
Oligopeptide transport system substrate binding protein {ECO:0000313|EMBL:EKF58921.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agroba similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 568.0
  • Bit_score: 1149
  • Evalue 0.0

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Taxonomy

Agrobacterium albertimagni → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1707
ATGAACACTCGCAAATTGATGCTGGCGGCGTCGGCTGCCGCTTTCGCGCTGACGGCAGCGCCGGCAATGGCCGAACGCGGCACGGACGGCGACCTGAAGATCATCTTCTGGCAGGCGGTATCGACGATGAACCCGTATCTGTCGGGGGGCACCAAGGAAGTCTACGCCGCCTCGATGGTCATCGAGCCGCTCGCCCGCTACGACGAAACCGGCGCGCTGGTGCCGATGCTCGCCACCGAAATTCCGACCGTCGAAAATGGCGGCGTGGCCGAAGACCTCAAGAGCATCACCTGGAAGCTGAAGCCCGATCTGAAATGGTCTGACGGCTCGGCCGTTACGGCCGAAGACGCAATCTTCACCTGGAAATATTGCACGGCGCCGGACGGCGGCTGCGCCCAGGGCGCCTATTTCGAAGGCGTGACCAATGTGGAAGCCGTTGATGCCTCCACCATCAAGGTCTCCTTCTCCGAAGCCAAGCCCTATCCTTATAGCGCCTTTGTCGGCGCCCAGTCGCCGATCATCCAGGCAGCTCAGTTCAAGGATTGCCTCGGCGCCAAGGCACCGGAATGCACCTCGGCCAACTTCAGCCCAATCGGCACCGGCCCCTTCGTCGTCAAGGAGTTCAAGCCGAACGACGTCGTGACCTTCGAAGCCAACAGCAATTACCGCGATGCCGCCAAGCCTGCATTCGCCTCGGTCACCCTGAAGGGTGGCGGTGACGCAGCATCCGCAGCGCGCTCGGTTCTCGAGACCGGCGAATTCGACTACGCCTGGAACATGCAGGTCGAGCCCGAGATCCTCGAGCAGATGATGGCCGCCGGCAAGGGCAAGATCGAAGTCGCCTTCGGCACGCAAGTCGAACGTATCGACATCAATCCTTACGGCGTCGATCCCTCGCTCGGCGACAAGCGCTCGACCAAGGAGGCTGGACCGCATCCGGCCCTGTCAGACCCGGCCGTTCGCCGCGCGCTCTCGATCGCCATCGACCGCGAGATCATCGATGAGGCTGGCTACGGCCCGAACGGTCAGCCGACCTGCAACATCCTGCCCGCTCCGGACATTTATGTCTCGACCGCCGTCGACTGGTGCCTGACGCAGGACATCGAGGGCGCCAACAAGCTGCTCGAAGATGCCGGCTGGAAGATGGGCTCGGATGGCATCCGCGAGAAGGACGGCGTCAAGCTCTCCTTCCTCTACCAGACCTCGACCAACTCCGTCCGCCAGGGCACCCAGGCGCTGGTCAAGGACATGTGGAGCCAGATCGGCGTGTCCGTCGAACTGCGCAACATCTCGGCCTCCGTCTTCTTCGGCGGCGACCCGGCCTCTCCGGACACCTTCCAGAAGTTCATGGCCGACATCCAGATGTACACCAACAACTTCGACGGCACCGACCCCGAGAAGTACATGGCCGGCTGGATGTGCGACAAGATCCCGAGCCCGGCCACCGGCTGGCAGGGTGAAAACATCGTCCGCTACTGCAACCCGGAATATGATGCGCTCGTGAAGGAGCTCGGCCAGACCGGCGAGCTTGAAAAGCGTGCCGAGATTGCCAAGAAGCTGAACGACATGCTCTCCAACGATGTCGCCCAGATCCCGCTGATCCACCGCGGTCAGCCCTCGGCTGTCAACAACACGCTGCTTGGCGTGAAGATGAACGCCTGGGATTCGGAACTCTGGAACGTCGCCGACTGGTCGCGCGCTAAGTAA
PROTEIN sequence
Length: 569
MNTRKLMLAASAAAFALTAAPAMAERGTDGDLKIIFWQAVSTMNPYLSGGTKEVYAASMVIEPLARYDETGALVPMLATEIPTVENGGVAEDLKSITWKLKPDLKWSDGSAVTAEDAIFTWKYCTAPDGGCAQGAYFEGVTNVEAVDASTIKVSFSEAKPYPYSAFVGAQSPIIQAAQFKDCLGAKAPECTSANFSPIGTGPFVVKEFKPNDVVTFEANSNYRDAAKPAFASVTLKGGGDAASAARSVLETGEFDYAWNMQVEPEILEQMMAAGKGKIEVAFGTQVERIDINPYGVDPSLGDKRSTKEAGPHPALSDPAVRRALSIAIDREIIDEAGYGPNGQPTCNILPAPDIYVSTAVDWCLTQDIEGANKLLEDAGWKMGSDGIREKDGVKLSFLYQTSTNSVRQGTQALVKDMWSQIGVSVELRNISASVFFGGDPASPDTFQKFMADIQMYTNNFDGTDPEKYMAGWMCDKIPSPATGWQGENIVRYCNPEYDALVKELGQTGELEKRAEIAKKLNDMLSNDVAQIPLIHRGQPSAVNNTLLGVKMNAWDSELWNVADWSRAK*