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cn_combo_scaffold_357_35

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(36830..39193)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1156935 species="Bacteria; Proteobacteria; Alp similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 787.0
  • Bit_score: 1525
  • Evalue 0.0
Ribonuclease R n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PCB5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 98.5
  • Coverage: 787.0
  • Bit_score: 1527
  • Evalue 0.0
rnr; ribonuclease R similarity KEGG
DB: KEGG
  • Identity: 83.9
  • Coverage: 794.0
  • Bit_score: 1311
  • Evalue 0.0
  • rbh

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Taxonomy

Agrobacterium albertimagni → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2364
TTGAGCAAGAGACACCGCGACCCCTCCGAGACACCCGGCTCCGGTAACCGCAAGAGCCGGCGGGCGGAAGGCGCGGCCAAGGCCAGGAGCGAAAACCCCACGGCCTTAATCCATGGGGAAGTGCCGCCTCGTGAAGTGCTCATGCAGTTCATCACGGACAATCCGGATCGCGCCTCGAAGCGCGAGATCGCCAAGGCCTTCGGGCTGAAGGGCGAGCAGCGCGTCGAGTTGAAGCAGGCGCTGAAGGATCTCGAAGAAGACGGCCTTGTGCAAAAGAGCCGCAAGTCCCTGACGCGACCCGGCGCCCTACCCCCGGTCACGGTTCTCGACATCACCACGCGCGACAAGGACGGCGAATTGATCGGCCGCCCGGCCGAGTGGCCGGAAGAGGCAGGCGCGGCACCGGCCGTTCTGATCCGCCAGTCGAGCTCCGACCGTTCCAAGGGCAAGGCGCCTGTTGGTGGCCTCGGCGACCGGGTGCTCGCCAAGATCTTCGCCAACAAGGACCGTACCGGTCCTTCCTATACTGCACGCGTCATCAAGATCCTCGACCGTCATGTCGGCGCTGTCATGGGCGTTGTCAGGATGATGCCTGACGGTGGTGCGCGCCTGATGCCGATCGACCGGCGCGGCGAGGAAATGCAGATCGATGCCACCGATATCGGCGAGGCCAAGGATGGCGACCTCGTCGAGGTGGAGGTCGGTCGTTCAGCTCGTTTCGGCCTGGCGCGGGCCAAGGTACTCAACGTCGTCGGATCGGTTGCCTCGGAAAAGGCGATCTCGATGATCGCAATCCACGCTCATGGCATTCCGCACATCTTTCCGCAGTCGGTGATCTCGGAGGCCGAGGCCGCCAAGCCTGCTTCCATGTCGCATCGGGAAGACTGGCGCGACCTGCCGCTCATCACCATCGACCCGCATGATGCCAAGGACCATGACGACGCCGTCTATGCCGAGCTCGACACCTCGCCGGACAATCCTGACGGCGTGATCGTGACGGTGGCGATCGCCGACGTCTGCTACTACATCCGGCCGAAATCGGCACTGGACCGCGAAGCCTTGAAGCGCGGCAATTCCGTCTACTTCCCCGATCGTGTCGTGCCGATGCTGCCCGAGCGGATCTCGAACGATCTCTGCTCGCTGCGCGAAGGCGTCGACCGCCCGGCGCTCGCCGTGCGCATGGTCTTCTCGCATGAGGGCCGCAAGGCGAGCCACACCTTCCACCGCATCATGATGAAGAGCGCGGCCAAGCTGTCCTATCAGCAGGCGCAGGCCGCCATCGACGGCAAGCCCGACGACAAGACCGGGCCGTTGCTGGAGCCGATCCTGAAGCCCCTGTGGCATGCCTATGCGGTGATGAAGCGCGGCCGTGACCGTCGCCAGCCGCTCGAACTCGACATGCCCGAGCGCAAGATCATCCTCAAGGAAGACGGCACGGTCGATCGCGTGCATGTCCCCGAGAGGCTCGACGCCCACAAGCTGATCGAAGAAATGATGATCCAGGCGAACGTCGCGGCTGCCGAGACGCTGGAGAAAAAGCGCCAGCCGCTGATCTACCGCATCCATGACGCACCGACGCTCGCCAAGCAGGAGGTGCTGCGAGAGTTTCTGGCCACTCTCGGCATGTCGCTGGTCAAGGGCGGCAACATGCGGTCCAACTCGTTCAATGGCATTCTGGCGAAAGCCGAGGACACGCCACATCAGGTGATCGTCAACGAGATGGTGCTGCGCAGCCAGAGTCAGGCGATCTACAGCCCTGAGAATATCGGCCATTTCGGCCTCAACCTGATGAAATATGCCCATTTCACCTCGCCGATCCGCCGTTATGCCGACCTCATCGTGCATAGGGCGCTGGTAGGCTCGCTGGGCCTGGGCGAAGGTGGGATCACGTCGGACGAGGAAGCAAGCCTCGAGGATATTGCGGCTGAGATCTCGACCTTCGAGCGCCGGGCGATGGCGGCCGAGCGCGACACGGTCAACCGCCTGATCGCGCATCATCTGGCCGGGCGCATCGGCGATGAGTTCGAGGGGCAGATCCGCGGCGTCACAAAGTCCGGTCTGTTCGTTGCCCTGCCGCAATTTGGCGCAGATGGCTTTATCCCGGTTTCAACACTGGGCCGGGACTACTATATCTACGACGAAGCGCATCAGGCCCTGACGGGCGAGAAGTCCGGGCTCGGTTATCAGCTCGGCGACGTCGTCGAGGTCAAGCTTGTGGAAGCAGTGCCGCTGGCCGGCGCGCTGCGCTTCGAGATGCTGAGCGAGGGACGCAAGATGCCGGCGGCGACGCGTTCCTTCCACAAGGCCGGACGGCGGAACGGGCGCAAGCAGCCCGGTACACGTCCGCCGCGCTCGCGACGTTGA
PROTEIN sequence
Length: 788
LSKRHRDPSETPGSGNRKSRRAEGAAKARSENPTALIHGEVPPREVLMQFITDNPDRASKREIAKAFGLKGEQRVELKQALKDLEEDGLVQKSRKSLTRPGALPPVTVLDITTRDKDGELIGRPAEWPEEAGAAPAVLIRQSSSDRSKGKAPVGGLGDRVLAKIFANKDRTGPSYTARVIKILDRHVGAVMGVVRMMPDGGARLMPIDRRGEEMQIDATDIGEAKDGDLVEVEVGRSARFGLARAKVLNVVGSVASEKAISMIAIHAHGIPHIFPQSVISEAEAAKPASMSHREDWRDLPLITIDPHDAKDHDDAVYAELDTSPDNPDGVIVTVAIADVCYYIRPKSALDREALKRGNSVYFPDRVVPMLPERISNDLCSLREGVDRPALAVRMVFSHEGRKASHTFHRIMMKSAAKLSYQQAQAAIDGKPDDKTGPLLEPILKPLWHAYAVMKRGRDRRQPLELDMPERKIILKEDGTVDRVHVPERLDAHKLIEEMMIQANVAAAETLEKKRQPLIYRIHDAPTLAKQEVLREFLATLGMSLVKGGNMRSNSFNGILAKAEDTPHQVIVNEMVLRSQSQAIYSPENIGHFGLNLMKYAHFTSPIRRYADLIVHRALVGSLGLGEGGITSDEEASLEDIAAEISTFERRAMAAERDTVNRLIAHHLAGRIGDEFEGQIRGVTKSGLFVALPQFGADGFIPVSTLGRDYYIYDEAHQALTGEKSGLGYQLGDVVEVKLVEAVPLAGALRFEMLSEGRKMPAATRSFHKAGRRNGRKQPGTRPPRSRR*