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cn_combo_scaffold_458_4

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 2965..3528

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase sigma factor n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QK23_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.5
  • Coverage: 183.0
  • Bit_score: 326
  • Evalue 2.50e-86
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:EKF61546.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agro similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 183.0
  • Bit_score: 326
  • Evalue 3.50e-86
putative RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 169.0
  • Bit_score: 206
  • Evalue 6.20e-51

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Taxonomy

Agrobacterium albertimagni → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGTTTGACGCGGTGCGATTTGTGAGTTTGGACGATTGCAAACCGGTCGATGAGACCGCTGATCTTCTCGCACGGGTGAGGGCGGGCGACGCGAGAGCTTTTGAACGGCTGATTTCAGAGCATTATCGCTTCATCTACAAGACGGCGTTTCGCTGGCTGGGTGACAAAAGCGATGCAGAGGATGTCACCCAATCGGTCTGCATGCGGCTGGCCGATGCGATCACACGCTTTGATGGACGTTCAAAATTCACCAGCTGGCTCTACCGTGTCACCCTCAATGCCGTGCGCGACCTCCAGCGCAAGGACATGAGAAAGGTCGAACAAATCAAGGCCGTGTCGGCAATGACGAGCGAGGACCTCGCCCCAGATCAGGAAGATCAGTTGCGCGTCAACGATATCTGGCGTGTCGTGCGCCAGCTGCCGCAAAAGCAGCGTGACGCCGTCCTTCTGGTGTTTGGAGAGCAACTTTCCCAGGCAGAAGCAGCTGAGATCATGGGGTGTAAGGAAGTGACTGTTTCCTGGCACATTCACAACGCGCGCAAGTCGCTGAGGGATCTGCTATGA
PROTEIN sequence
Length: 188
MFDAVRFVSLDDCKPVDETADLLARVRAGDARAFERLISEHYRFIYKTAFRWLGDKSDAEDVTQSVCMRLADAITRFDGRSKFTSWLYRVTLNAVRDLQRKDMRKVEQIKAVSAMTSEDLAPDQEDQLRVNDIWRVVRQLPQKQRDAVLLVFGEQLSQAEAAEIMGCKEVTVSWHIHNARKSLRDLL*