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cn_combo_scaffold_759_47

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(54658..55326)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UM13_SINMW similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 222.0
  • Bit_score: 404
  • Evalue 5.00e-110
two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 92.8
  • Coverage: 222.0
  • Bit_score: 404
  • Evalue 1.40e-110
  • rbh
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABR64693.1}; Flags: Precursor;; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobi similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 222.0
  • Bit_score: 404
  • Evalue 7.00e-110

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Taxonomy

Sinorhizobium medicae → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGCGGGTACTGTTGGTGGAAGACGATGAGATGCTGGGCGATGCCGTGAAGACGCATGTCGACCGCCAGGGCCATGCCGTGGACTGGGCGCTGACGCGCGACGAGGCGGAAGCCAGCCTCGAGGCCGTGGCTTATGATCTCGTTCTCCTCGACCTGCGGCTGCCGGATGGAAGCGGGCTCGACATCCTCAAGGTTCTGCGCGCCCGCCGCGACGAGATGCCGGTCATCATAATGACGGCGCATGACCAGGTGTCGGACCGGATCGCCGGGCTGAATGCCGGCGCGGACGACTACCTCGTCAAGCCCGTCGATCTCGGCGAATTGCAGGCCCGCATACACGCCGTGTCGCGACGCTATGGAACGCACAAGCTGCCCGATCTGACGATCGGGGGCCTTGCCATCTACCCGTCCGAACGACGGATTGCCGGCAGAGGCGGCGAGGAAATCCAGTTGTCCTCGCGCGAATGGGCCGTTCTCGACAGGCTGATCGCCCGCAAGCGCGCCATCGTTTCCAAGGCCCAGATCGAAGAAGCGCTGTATGCCTTCGGGGCAGAGGTCGAGAGCAACACCGTCGAGGTCTATGTCAGTCGCCTGCGGCGCAAACTCGGCAAGGATTCGATCGAGACCGTGCGCGGTGTCGGCTACAGGATTTCCGGCGATGCGACTTGA
PROTEIN sequence
Length: 223
MRVLLVEDDEMLGDAVKTHVDRQGHAVDWALTRDEAEASLEAVAYDLVLLDLRLPDGSGLDILKVLRARRDEMPVIIMTAHDQVSDRIAGLNAGADDYLVKPVDLGELQARIHAVSRRYGTHKLPDLTIGGLAIYPSERRIAGRGGEEIQLSSREWAVLDRLIARKRAIVSKAQIEEALYAFGAEVESNTVEVYVSRLRRKLGKDSIETVRGVGYRISGDAT*