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cn_combo_scaffold_923_4

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(3313..4440)

Top 3 Functional Annotations

Value Algorithm Source
Secretion protein HlyD n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PIN4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 354.0
  • Bit_score: 650
  • Evalue 8.80e-184
Secretion protein HlyD {ECO:0000313|EMBL:EKF60723.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 354.0
  • Bit_score: 650
  • Evalue 1.20e-183
RND efflux membrane protein similarity KEGG
DB: KEGG
  • Identity: 41.9
  • Coverage: 353.0
  • Bit_score: 255
  • Evalue 2.30e-65

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Taxonomy

Agrobacterium albertimagni → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1128
ATGCCCACCCCGTTGGTAACGCGCCAGATGGGTCGGTTGCCCCCGACGTCAACAAAATTTCCCTTGCTGGTCGCGGCAGTTTTGCCCCTCCTGCTCGCCTCTTGCAGCGACGATGTGTCGGAGAAGGCCGGCTATGTGCCGACGGTGAGGGTCGCAACCGCGGCCGCCGTGTCCGATGTTGTTACCGTTTCCGGTACCGGAGAGGTGAAGCCCCGGGTGGAAAGTGTCCTGTCCTTCAAGGTCAGCGGTCGCGTCATTGCCCGTGATGTCGAAGTCGGTGATCGGGTAAAGGTTGGCCAGGTGCTTGCCAGCCTTGATCCGACGGAACAGAAGGCGGATCTGACGGCGGCAGAAGCGGCCATACGGGCCCGCCAAGCCACTTTGCGCACCGCCGAATCCTATCTCAACCGCCGCCGTACCCTGACCCAGACAGGTGCTCTGCCGCAGCAGCAGCTGGACGAGGCGATCCAGCAATATGATTCGGCCGTCAATGATCTCGATGCGGCTCAGGCCAATCTCGCAAGCGTTCAGGAGAGCCTGGCTCAGACGGAGCTGAAAGCCGATGCCGATGGTCTTATCACGGCCGTGAGCATCGAACCGGGCGAAGTCGTGCAGCCTTCCTCGGCCGCATTCGAGCTCGCCCATGATGGTGAACTCGATGCGGTCTTCAACGTGGATGAAAGTGCCTTGACCAGGGATGCCCAGCCTGAATCGGTGGAAGTGGCTCTTGTCGATCGTCCGGATATTCGCGCAGTTGCCAAAATTCAGGAGATCAGCCCCTCGGTGGATCGCAAGCTCGGCACCGTACGCCTGAAGCTGTCGATCACCGATCCGCCACCGGAGATCACGCTGGGTTCAGCAATTGTGGCCTATGCGAAGCTCTCCGAAGTGGGGCGGATATCCATTCCGTCGCAGTCTTTGACGAGTGCCAACGGAAAGCCCGCCGTCTTCGTCGTCGATCCGGCGACAGAAACCGTCGAGACCCGTCAAATCGAGGTGCTGCGCTACGACGCCGACCGGATCATCGTCGCCAACGGGCTTGAACCCGGTGATCAGTTCGTCGTCGAGGGAACGCAGTTTCTCTACCCGAAACAAAAGGTTCGTACGGTTCAGGGAGACGCGCAATGA
PROTEIN sequence
Length: 376
MPTPLVTRQMGRLPPTSTKFPLLVAAVLPLLLASCSDDVSEKAGYVPTVRVATAAAVSDVVTVSGTGEVKPRVESVLSFKVSGRVIARDVEVGDRVKVGQVLASLDPTEQKADLTAAEAAIRARQATLRTAESYLNRRRTLTQTGALPQQQLDEAIQQYDSAVNDLDAAQANLASVQESLAQTELKADADGLITAVSIEPGEVVQPSSAAFELAHDGELDAVFNVDESALTRDAQPESVEVALVDRPDIRAVAKIQEISPSVDRKLGTVRLKLSITDPPPEITLGSAIVAYAKLSEVGRISIPSQSLTSANGKPAVFVVDPATETVETRQIEVLRYDADRIIVANGLEPGDQFVVEGTQFLYPKQKVRTVQGDAQ*