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cn_combo_scaffold_923_22

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(24487..25113)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTM8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 206.0
  • Bit_score: 325
  • Evalue 4.70e-86
Transcriptional regulator {ECO:0000313|EMBL:EYR77364.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 206.0
  • Bit_score: 325
  • Evalue 6.60e-86
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 203.0
  • Bit_score: 288
  • Evalue 1.40e-75

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGACCGGATTGCGCGCCCGACAGAAGGCCGACAGGAACCGTCGCATCCTGGACTCGGCAACGACCCTGTTCCGGGAGCAGGGCTATGACAGTGCGCGCATCGAAGATATCGCCGAGATGGCAGAGGTCTCGGTCGGCACGCTCTACAACTACTATCAGAACAAGGGAGACATCCTCGTCGCGACCGTTTCGATGGAGGTGACCGAGGTGCTCGAGGCCGGTGAATTGATTGTCGCCAATCCGCCGCTCAACGTGAGCGATGCGCTCGGCGCGCTGATCAACCAGTATTACGATCACTCGCTCGTCTATCTCAGCAAGGAGATGTGGCGCACGGCGATGGCGTCCTCGATCCACCAGCCAGAAACGCCGCTGTCCAAGCGTTACACTGAGCTAGATACGCGTCTCTGTGCCCAGGTCGTGCAGCTCATCGAGACCTTGCAGCGGCGCGGTGTGATTGTCGCCGGCGTCGATGCACGGGCGCTGGGTGAGGTGTTCTTCAACAACCTCAACATGATGTTCATCGAGTTCTGCAAGAAAGAAAGCATGCCGCTTGAAGAGCTCAAGGCCCGTGTCGCCGAGCAGAACCGCCCGATCGCCGAATTGATCAGCGGCGTGAAGCGCCTCTGA
PROTEIN sequence
Length: 209
MTGLRARQKADRNRRILDSATTLFREQGYDSARIEDIAEMAEVSVGTLYNYYQNKGDILVATVSMEVTEVLEAGELIVANPPLNVSDALGALINQYYDHSLVYLSKEMWRTAMASSIHQPETPLSKRYTELDTRLCAQVVQLIETLQRRGVIVAGVDARALGEVFFNNLNMMFIEFCKKESMPLEELKARVAEQNRPIAELISGVKRL*