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cn_combo_scaffold_5523_4

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 3434..4648

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter subunit n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JQ16_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 393.0
  • Bit_score: 659
  • Evalue 2.70e-186
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 82.4
  • Coverage: 393.0
  • Bit_score: 659
  • Evalue 7.50e-187
  • rbh
ABC transporter subunit {ECO:0000313|EMBL:ACM31235.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agr similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 393.0
  • Bit_score: 659
  • Evalue 3.70e-186

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1215
ATGACCAATTTCAAGCCCAAGACGCCGGGCCTCGCGATGACGCGCAGGAATTTCCTCGGCGCAACGGCAGCCGGAGCCGCAGGTCTGGCACTGGGGTTCCCGAAACCCGCAATTGCCCAGGGCGCGCCCCTGAAGGTGGGGCTGATGCTGCCTTTCAGCGGTACCTACGCCAAGCTCGGGCAGTTCATCGAGAACGGCTTCAGCCTCTATGTGGAGCAGAAATCCGGGATCCTCGGCGGCCGCAAGGTGGAGTTCATCCGCTTGGACGACGAGTCGAAGCCCGAAACCGCCACCGACAACATGAACAGGCTGGTCAGTCGCGACAAAGCCGACGTGGTGATCGGCACCGTTCATTCCGGCGTTGCCATGGCGATGGTGAAGGTTGCGCGCGACAGCGGCGTGCCGCTCATCATCCCGAATGCCGGCGCCGACGAGGCGACCGGGCCGCTCTGCGCGCAGAACATCTTCCGCACGTCCTTCTCCAACTGGCAGCCGGCCCATCCGATGGGCAAGGTCGTATTTGACGAAGGCCACCGCAACGTCGTCACCATCACTTGGCGCTACACCGCCGGCCAGCAGATGGTAGGGGCCTTCACCGAGGGCTTCGAGGCGGCCGGCGGCACGGTCGTCGACGCGCTGACGCTGCCCTTCCCGGAGGTCGAGTTCCAGGCGCTCATCACGCGTATCGCGACACTGAAGCCCGACGCGGTGTTCGCGTTCTTCGCCGGCGGTGGCGCCGTGAAGTTCGTCACCGACTACGCTGCAGCTGGCCTCAAGGGCAAGATCCCGCTCTACGGCACCGGCTTCCTGACCGACGGCACGCTGAAGGCGCAGGGCGATGCCGCAACCGGCGTCCGCACCACCCTCCACTATGCCGACGATCTCGACAATCCCGCCAACAAGGCGTTCCTGTCGGCCTTCCAGGCCAAGACCGGCGAGGCGGGCGACATCTACGCGGTGCAGGGCTACGACGCCGGGGCGCTGCTGGAAGCAGGTCTGACGGCTACTAGTGGCGACGTTTCCGCGCGCGATGCGCTGTTCGCCGCGATGGCGGGCGCCAGGATCGACAGTCCGCGCGGGCCGCTCAGCTTCTCGTCCGCGCACAATCCGATCCAGAACATCTACCTCCGCGAGGTTCGCGACGGGCGCAATGCCTTCGTCTCCGTCGCCGGCGAGGCCGTGCAGGACCCCGCACGCGGCTGCCGCCTGACCTGA
PROTEIN sequence
Length: 405
MTNFKPKTPGLAMTRRNFLGATAAGAAGLALGFPKPAIAQGAPLKVGLMLPFSGTYAKLGQFIENGFSLYVEQKSGILGGRKVEFIRLDDESKPETATDNMNRLVSRDKADVVIGTVHSGVAMAMVKVARDSGVPLIIPNAGADEATGPLCAQNIFRTSFSNWQPAHPMGKVVFDEGHRNVVTITWRYTAGQQMVGAFTEGFEAAGGTVVDALTLPFPEVEFQALITRIATLKPDAVFAFFAGGGAVKFVTDYAAAGLKGKIPLYGTGFLTDGTLKAQGDAATGVRTTLHYADDLDNPANKAFLSAFQAKTGEAGDIYAVQGYDAGALLEAGLTATSGDVSARDALFAAMAGARIDSPRGPLSFSSAHNPIQNIYLREVRDGRNAFVSVAGEAVQDPARGCRLT*