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cn_combo_scaffold_6606_7

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(8491..9180)

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Rhizobium sp. CF142 RepID=J1TI53_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 62.1
  • Coverage: 195.0
  • Bit_score: 252
  • Evalue 4.30e-64
Periplasmic component of amino acid ABC-type transporter/signal transduction system {ECO:0000313|EMBL:EJJ31616.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 62.1
  • Coverage: 195.0
  • Bit_score: 252
  • Evalue 6.00e-64
amino acid ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 202.0
  • Bit_score: 248
  • Evalue 1.30e-63

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
TGCGGCCATGGCTGGTGCGTCCAGCATGGCGTAGTATTGTTCTTCGGCCTCGGCTGGCGGGATATTCCCGATGGGCTCCAGAAGGCGACGGTGGTTGCGGAAGCCAGGTTCGAATGTCAGCTCGTAGTCCAGGAATGGACAGCGATGATCCCCAACCTGATTGCAGGCAAGTTCGACGCCATTATCTCATCCATGTCGATGAGCGCAGAAAGGCGCGCCAAGGTCGCCTTCACCAGCCGATACTATGACAGTCCAACCGTCTTCGTGAAGCAGAAGGATCTGAAGGCCTTGTCGGGAGACCCGCAGGAACTGGCGGGGCTGACGCTCGGCGTCACTGCCGGTACAGCCCAGGCGGAATATGCAAAGAGGTTCTATCCCGAAGTGGAGACGGTGGTCTTTCAAGCCTCCACTGACCTTTACAAAGGGCTCTCCGACAAGGTGGTGGATGTCATACTTGAAGACAAGTTGGCAATCTTTGACTGGCTGACCAATACCCGGGCTGGCACTTGTTGTGACTTTACGGGAGCCGACATCAAAGACGACGAATTCTTCGGCGAAGGGGCGGGGATTGCCGTGCGTCAGCAAGACGAGGAGCTGCGTCAGGCCCTGGATGAGGCCCTGGTCGCGATCAAGGAGAACGGCAAATACGACGAGATCAATGCCAAGTATTTTCCGTTCACCATTCAATGA
PROTEIN sequence
Length: 230
CGHGWCVQHGVVLFFGLGWRDIPDGLQKATVVAEARFECQLVVQEWTAMIPNLIAGKFDAIISSMSMSAERRAKVAFTSRYYDSPTVFVKQKDLKALSGDPQELAGLTLGVTAGTAQAEYAKRFYPEVETVVFQASTDLYKGLSDKVVDVILEDKLAIFDWLTNTRAGTCCDFTGADIKDDEFFGEGAGIAVRQQDEELRQALDEALVAIKENGKYDEINAKYFPFTIQ*