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cn_combo_scaffold_7627_3

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 2029..2631

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Oceanibaculum indicum P24 RepID=K2K0P4_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 199.0
  • Bit_score: 344
  • Evalue 9.40e-92
TetR family transcriptional regulator {ECO:0000313|EMBL:EKE76329.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 199.0
  • Bit_score: 344
  • Evalue 1.30e-91
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 67.9
  • Coverage: 190.0
  • Bit_score: 245
  • Evalue 9.80e-63

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Taxonomy

Oceanibaculum indicum → Oceanibaculum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGACAAACGACGCGCCCGATCATCGTGACCGCATCTTAGACGCGGCTGCCGAGCAGGTCCGCCGCTTTGGCGAGGCAAAGACCAATGTGGTCGACATCGCCAAGGCCATGGGCCTTTCACATTCGGCGATCTACCGGCACTTCCGGTCGAAGGCGGATATCTTCGACGCCTTGGCCGCACGGACCATGGCCGAGGAGGCCGAACTGGCGGCCCGCTTCGTAAACGCCGATGGTTCTGCAGAAGACAGGCTGCGCGGTCTCGTGCTGGCGCTCCATCGCAGCAAACGCGCTAAGCTGGGGGACGACCCGGAGATCCACGGCCTCTACCGCCGGATAGTCGCGGAGCGTCCGGACTTGGTCGCCGACTATGCGCGACGCATGACCGGGCTCGTCCGGCAAGTGTTGAACGATGGGGTGGCGCGGGGCGAGTTCCGTGTCCCCAACCTCGACGCAGCTGCCGGTGTGGTGCGCGACGCGGTCACGGTCTTCATCCATCCAGCCCATGTGGAGCAGGCTGTCGTAGCCGGGTTGGATATGGAGCCAAGGCTTCAAGCGGTAATGGATGCCTTGGCGGTGGCTTTCGCGGCTACCAAGCGGTTTTAA
PROTEIN sequence
Length: 201
MTNDAPDHRDRILDAAAEQVRRFGEAKTNVVDIAKAMGLSHSAIYRHFRSKADIFDALAARTMAEEAELAARFVNADGSAEDRLRGLVLALHRSKRAKLGDDPEIHGLYRRIVAERPDLVADYARRMTGLVRQVLNDGVARGEFRVPNLDAAAGVVRDAVTVFIHPAHVEQAVVAGLDMEPRLQAVMDALAVAFAATKRF*