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bjp_ig3402_scaffold_7648_7

Organism: BJP_IG3402_Parcubacteria_38_155

near complete RP 41 / 55 MC: 2 BSCG 42 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 7166..8518

Top 3 Functional Annotations

Value Algorithm Source
RpoD subfamily RNA polymerase sigma-70 factor; K03086 RNA polymerase primary sigma factor Tax=RIFCSPHIGHO2_01_FULL_OD1_Moranbacteria_54_31_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.9
  • Coverage: 463.0
  • Bit_score: 528
  • Evalue 1.10e-146
cth:Cthe_0895 RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor id=8996 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 453.0
  • Bit_score: 508
  • Evalue 5.00e-141
  • rbh
RNA polymerase, sigma 70 subunit, rpod subfamily similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 422.0
  • Bit_score: 396
  • Evalue 7.70e-108

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Taxonomy

R_OD1_Moranbacteria_54_31 → Moranbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1353
ATGGCGAAAAAAAACAAAAAAAAGCTGTTTCGCGGCGCAACTAAACATTTCAGAAGAAAAAAGGCGGCGCGGAAAGCAAGGAAAATTAAAATTGCAAAAAAAATTGTTAAGCAAAAGGCGAAGAAGCGCGCTGGCAGACTAAAAAGGAAAGCCCTTCGACAGGCTCAGGGTAAACTACAGAAAAAAATCGTTTCTAAAAAAGCGCTTCAGAGAGAAATTAAAACAAAGGAAGCTGTTTTAGCTCTGGAAAAAGAAAAAGAAAACGCGATTAATGATTTAATTTCCCGGGGCAGGGATAGGGGTTTTGTGACGGAAGGAGAAATTTTATCCGCGATTGGCGATATTGAAAACCATCTGGACTCGCTGGAAGATTTATACAGAAAGCTGGAAGATTCAAATATTCGAATTGAGGCAGGCAAAGTGGCAATTTCAGCGACAGAAGCTGAAATCGAAGAAGACGCGGAGAAAAAAACTGCCGCCTTAGTTCCTGATGTTTCTAAAGAACTGCCGCCGGATGAAATCAGCACCAATTCAGTGCAGATGTATTTGAAAGAAATTGGCAAGGTTTCTCTTTTGACCGCTCAGGAAGAAGTTGAACTGGCAAAGAGAATTGAAAAAGACGACGAAGCGGCCAAGAAAAGATTAGCCGAGGCGAACTTGCGCTTAGTGGTAAGCATCGCGAAAAAATATGTCGGACGGAGCCATAATTTAACTTTGCTTGATTTGATACAGGAGGGAAATATCGGTTTGTTTCGGGCGGTGGAAAAATACGATTGGCACAAAGGCTACAAATTTTCCACTTATGCCACTTGGTGGATCAGGCAGGCAATTACCAGGGCACTTGCCGATCAGTCGCGCACGATTCGGATCCCGGTGCATATGGTGGAAACGATTAATAAATTCGCGCAGATTACCCGCCGTTTGGTCCAGGATTTGGGCCGCGAACCTTTGCCGGAAGAGATCGCTTCGGAAATGGGAATGGAAGTGGAAAAAGTCCGCTATATTATGAAAATTTCTCAGGATACTATTTCTTTGGAAACAAGCGTGGGAGAAGAGAGCGACGAAAGCACTTTGGGAGATTTTATTGAAGATACGGAAACAATTTTGCCGAATCAAGCGGCGGCCAGAAAACTTTTAAAAGATTATATTACGGAAATTTTGGTGAAAGTGAGCCCTCGCGAGCAGAAAATATTAAAAATGCGTTTTGGGCTGGAAGACGGAATTACTCACACTTTGGAAGAAATCGGCCAGGAATTCGGCGTGACTCGCGAGCGCATCCGCCAAATTGAAGCTAAAGCCCTTGACAGGATCAAGAAACATCCGGAAGCCAAGAAACTGCTTGATTATTTTTAA
PROTEIN sequence
Length: 451
MAKKNKKKLFRGATKHFRRKKAARKARKIKIAKKIVKQKAKKRAGRLKRKALRQAQGKLQKKIVSKKALQREIKTKEAVLALEKEKENAINDLISRGRDRGFVTEGEILSAIGDIENHLDSLEDLYRKLEDSNIRIEAGKVAISATEAEIEEDAEKKTAALVPDVSKELPPDEISTNSVQMYLKEIGKVSLLTAQEEVELAKRIEKDDEAAKKRLAEANLRLVVSIAKKYVGRSHNLTLLDLIQEGNIGLFRAVEKYDWHKGYKFSTYATWWIRQAITRALADQSRTIRIPVHMVETINKFAQITRRLVQDLGREPLPEEIASEMGMEVEKVRYIMKISQDTISLETSVGEESDESTLGDFIEDTETILPNQAAARKLLKDYITEILVKVSPREQKILKMRFGLEDGITHTLEEIGQEFGVTRERIRQIEAKALDRIKKHPEAKKLLDYF*