ggKbase home page

bjp_ig3402_scaffold_17714_1

Organism: BJP_Ig3402_Miz_0z3_300_2014_Nitrospirae_40_5

partial RP 35 / 55 MC: 3 BSCG 36 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: comp(2..2584)

Top 3 Functional Annotations

Value Algorithm Source
rpoC; DNA-directed RNA polymerase, beta' subunit (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=GWB2_Nitrospirae_47_37_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 862.0
  • Bit_score: 1376
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 862.0
  • Bit_score: 1326
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' id=1845420 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum) similarity UNIREF
DB: UNIREF100
  • Identity: 80.3
  • Coverage: 862.0
  • Bit_score: 1376
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWB2_Nitrospirae_47_37_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 2583
GCCTCCATTGGGATGAAAAAAAAGCATACAAAGAGGCTAAAAATAGTTGAAGCTTTCATAAAGTCTGGAAACAAGCCGGAATGGATGATACTCGATATAATTCCAGTTCTACCCCCTGATTTGAGGCCTCTTGTTCCATTAGACGGCGGCCGATTCGCAACTTCTGATCTTAATGATTTATATAGAAGGGTGATAAACAGAAATAATAGACTCAAAAGACTTATCGATCTCAAAGCACCTAGTGTAATAATAAAAAATGAAAAGAGAATGCTTCAGGAAGCAGTAGATTCACTTTTTGATAATAGCAAGAAGATTAAATCACTCAAGGCAGGAGCAAAACGTTCATTAAAATCACTGAGCGATATGATTAAAGGCAAACAAGGTCGTTTCAGACAAAACCTGCTTGGCAAAAGGGTTGACTATTCAGGTCGTTCAGTCATTGTTGTGGGTCCTGATCTTAAGCTTAACCAGTGCGGCATCCCCAAAAGCATGGCTCTTGAGCTTTTTAAGCCTTTCGTTTTCAATAAGCTTGAAGAAAAAGGCTTTGCAAATACAATAAAACAGGCAAAGAGGTTGGTTGAAAAGGAAAAGCCAGAGGTATGGGACGCCTTAGAGGATGTGATCCGAGAGCATCCTGTTCTTTTAAACCGTGCTCCAACCCTCCATAGATTGGGCATTCAGGCATTTGATCCTGTATTGGTTGAGGGGAAAGCTATACAGCTTCATCCGCTTGTTTGCACCGCATTTAATGCCGATTTTGATGGAGACCAGATGGCTGTTCATGTTCCTCTCTCAATCGAAGCTCAGATAGAAGCAAGGGTGTTAATGATGTCGGTCAACAATCTTCTTTCCCCTGCCAATGGAAAACCAATTGTTGTTCCATCTCAGGATATGGTTTTAGGAATTTACTATCTTACAAAACAAAAGACAGGGGCAATTGGTGAGAATAAGCTCTTTTCTGATCCAGAAGATGTGCTCCAGGCATATTATTCAGGCGTGGTAGAAGAACACGCAAAAATAAGAGTTAGGATGAATGGTCAGGTTGTTGAGACAACGACTGGCAGGATTATCTTCAAAGAGATACTACCTAATGATATTCCTTTTTCAGCAATTAATAAAGATTTAACTAAAAAGGAACTTGGAAAGCTCATCGAGTATATACATAAATTTTCAGGTAAAAGAGAGACTGTTGTCTTTTTGAACAATCTTGAAAAATTGGGGTTCCAATATGCGACTTTAGCTGGAATTTCCATATGCATTGATGATATGCATGTGCCTTCGAAAAAGCCTGAGCTAATAAAAGAGGCGGAGCAGGAAGTAATGGAAGTCCAAAGGCAGTATTCTGAGGGTTTGATAACACAGGGGGAAAGGTATAACAAGGTTATAGATATCTGGGCAAATGTTACCGAGAAAGTTGCTGATGAAATGATGAAAGAACTCGGCGCTGAAAAAGGCGTTTCTGTTTCCGAAGAAATCCTAAAAGAGCGGAGGTCTTTCAACAGCATCTATATGATGGCAGATTCAGGCGCAAGAGGAAGCACTGCACAGATAAGGCAGCTTGCTGGAATGAGAGGACTCATGGCGAAGCCATCAGGTGAGATTATAGAGACTCCTATCACAGCAAACTTCAGGGAAGGTCTCAGCCCAATCCAATATTTTATCTCCACTCACGGAGCCAGAAAAGGGCTTGCTGACACTGCTTTGAAGACTGCCAACGCAGGTTATCTGACAAGAAGGCTTGTGGATGTTGCTCAAGATGTTATATTGACAGAGAAGGATTGCGGTACAGATAATGGGATAATTTTAACCTCACTTATAGAGGGCGGTGAAATAGTTCAACCCCTTGAGGAGAGAATATTTGGGAGGACTTTGGCTGAGAAATTAAAAGACCCTGATGGCAAAGTTATAGCAAACAAAAATGACATCATAGATGTTGACCTCGCAAAGAAAATAATAGATGACGGGATTGGCAAGGTCAAAATCAGGTCTGTGCTCACATGTGATTCAAAAAAAGGCGTATGTGTGAAATGTTATGGTCTTGATCTTGCGAGGGGAGAACTTGCTGAAATCGGTGAAGCGATCGGAATTATAGCTGCTCAATCCATTGGCGAACCAGGAACTCAGCTTACTATGAGGACATTTCATATCGGCGGTGCCGCTACGAAGATAATTGAACAGGCTGTTCATATTGCTAAAAATTCTGGTTTCATTAAATTCATAGATATAAGCTCGGTAAGAAACAAAGAAGGGCATCTTGTTGTTATTAACAGAAATGCAATGATAGCAATTGTTGATGCTACAGGAAGGGAAAAAGAAAAGTATAACCTTGTTTACGGAGCGAGGATATTTATCAAAGATGAGTTTGGTAAAGTAATCACCGTTGCGGATGGAACACAGATCGAAGCAAGCACGCCATTTGTCGAGTGGGATCCATATTCCACGCCTATCATAACAGAGATTGGTGGTAAAATAGCTCTAGGTGACATTTTAGAGGGAATTACATTCAAAGAGGAAGTTAACGAAACTACTGGGCTCGCATCTAAAGTTATTATAGAGAATCCTGTAACATATAGACCCAGAATT
PROTEIN sequence
Length: 861
ASIGMKKKHTKRLKIVEAFIKSGNKPEWMILDIIPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIDLKAPSVIIKNEKRMLQEAVDSLFDNSKKIKSLKAGAKRSLKSLSDMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPDLKLNQCGIPKSMALELFKPFVFNKLEEKGFANTIKQAKRLVEKEKPEVWDALEDVIREHPVLLNRAPTLHRLGIQAFDPVLVEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSIEAQIEARVLMMSVNNLLSPANGKPIVVPSQDMVLGIYYLTKQKTGAIGENKLFSDPEDVLQAYYSGVVEEHAKIRVRMNGQVVETTTGRIIFKEILPNDIPFSAINKDLTKKELGKLIEYIHKFSGKRETVVFLNNLEKLGFQYATLAGISICIDDMHVPSKKPELIKEAEQEVMEVQRQYSEGLITQGERYNKVIDIWANVTEKVADEMMKELGAEKGVSVSEEILKERRSFNSIYMMADSGARGSTAQIRQLAGMRGLMAKPSGEIIETPITANFREGLSPIQYFISTHGARKGLADTALKTANAGYLTRRLVDVAQDVILTEKDCGTDNGIILTSLIEGGEIVQPLEERIFGRTLAEKLKDPDGKVIANKNDIIDVDLAKKIIDDGIGKVKIRSVLTCDSKKGVCVKCYGLDLARGELAEIGEAIGIIAAQSIGEPGTQLTMRTFHIGGAATKIIEQAVHIAKNSGFIKFIDISSVRNKEGHLVVINRNAMIAIVDATGREKEKYNLVYGARIFIKDEFGKVITVADGTQIEASTPFVEWDPYSTPIITEIGGKIALGDILEGITFKEEVNETTGLASKVIIENPVTYRPRI