ggKbase home page

bjp_ig3402_scaffold_31660_2

Organism: BJP_Ig3402_Miz_0z3_300_2014_Nitrospirae_40_5

partial RP 35 / 55 MC: 3 BSCG 36 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: comp(149..802)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S3 id=2101435 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum) similarity UNIREF
DB: UNIREF100
  • Identity: 87.6
  • Coverage: 209.0
  • Bit_score: 376
  • Evalue 1.40e-101
  • rbh
rpsC; ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=GWB2_Nitrospirae_47_37_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 209.0
  • Bit_score: 375
  • Evalue 4.40e-101
rpsC; 30S ribosomal protein S3 similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 206.0
  • Bit_score: 342
  • Evalue 6.40e-92

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWB2_Nitrospirae_47_37_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 654
TTGGGTCAAAAGACTAATCCAATCGGTAACAGAGTTGGAATAATTAGGACGTGGGAGTCGAGATGGTTTCTTAAGAAGGGTTATTCAGATCAGCTCATTGAGGATTTTAAAATACGGAAATTGATTAAAGAAAAACTATACCACGCCGGGGTTGCAAAGATTGAGTTAGAAAGACCTGGTCAGAAGGTTAAGTTGATAATATACACCGCAAGACCAGGGATAATTATAGGTAAAAAAGGAGCAGAAGTAGAGAAGCTTAAAAAAGAGGTCGAAAATATCACCGGCAAGCAAGTCGGGGTTGATATAAAGGAAGTGAGAAAACCAGAGGTAAATGCCCAACTTGTATCTGAGAATATTGCAATGCAGTTAGAGAAGAGAGTTGCCTTCAGAAGAGCCCTTAAAAGGGCTGTTTCATCAGCTATGAGGTTTGGAGCTTTAGGAATAAAGGTGCAATGCTCAGGCAGGCTCGCAGGCGCTGAAATTGCCCGTTCAGAGTGGTATCGGGAGGGCAGGGTTCCTCTGAACACTTTCAGATCCGATGTTGATTATGGTTTTACTGAAGCAAAGACAACTTATGGAATTATAGGGATAAAGGTATGGATATACAGCGGTGATATTTTAGGAGAGATTAGAGGAGTTACTGAGAGGGAGTGA
PROTEIN sequence
Length: 218
LGQKTNPIGNRVGIIRTWESRWFLKKGYSDQLIEDFKIRKLIKEKLYHAGVAKIELERPGQKVKLIIYTARPGIIIGKKGAEVEKLKKEVENITGKQVGVDIKEVRKPEVNAQLVSENIAMQLEKRVAFRRALKRAVSSAMRFGALGIKVQCSGRLAGAEIARSEWYREGRVPLNTFRSDVDYGFTEAKTTYGIIGIKVWIYSGDILGEIRGVTERE*