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BJP_Ig3402_Miz_0z3_300_2014_Nitrospirae_40_5

BJP_IG3402_Nitrospirae_40_5

In projects: 09MI20_z3_2014 | 09mi20_drep | mizunami_genomes

Consensus taxonomy: Nitrospirae → Bacteria

Metagenomic Context

Parent: BJP_IG3402_UNK Curated version: BJP_Ig3402_Miz_0z3_300_2014_Nitrospirae_40_5_curated

Properties

Avg. coverage: 4.86 Longest contig: 7.81 Kbp Bin length: 1.40 Mbp GC content: 39.70 %

Contigs count: 758 Features count: 1870 rRNAs count: 0 tRNAs count: 17

Genome completeness

partial RP 35 / 55 MC: 3 BSCG 36 / 51 MC: 2 ASCG 8 / 38 MC: 1

Displaying items 751-758 of 758 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
bjp_ig3402_scaffold_24717 Species: uncultured Desulfobacterium sp. (100%)	1	1972 bp	41.43	10.65	99.95
bjp_ig3402_scaffold_53123 Species: marine sediment metagenome (100%)	1	1038 bp	35.55	10.69	88.15
bjp_ig3402_scaffold_26845 Species: GWC2_Elusimicrobia_56_31_curated (50%)	2	1845 bp	40.05	10.73	72.03
bjp_ig3402_scaffold_25990 Domain: Bacteria (80%)	5	1894 bp	37.43	11.09	87.43
bjp_ig3402_scaffold_33848 Species: marine sediment metagenome (100%)	1	1527 bp	41.72	12.38	69.94
bjp_ig3402_scaffold_30686	1	1655 bp	72.39	12.69	99.88
bjp_ig3402_scaffold_26785 Species: RIFOXYB12_FULL_Lentisphaerae_65_16_curated (100%)	2	1848 bp	72.89	14.12	81.33
bjp_ig3402_scaffold_54580 Species: RBG_19FT_COMBO_Nitrospirae_58_9_curated (100%)	1	1014 bp	49.31	15.98	97.34

Displaying items 751-758 of 758 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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