ggKbase home page

Ig5770_scaffold_2940_2

Organism: Ig5770_Miz_z4_200_2015_Parcubacteria_42_5

partial RP 32 / 55 BSCG 39 / 51 MC: 4 ASCG 7 / 38 MC: 1
Location: comp(515..829)

Top 3 Functional Annotations

Value Algorithm Source
Marine sediment metagenome DNA, contig: S06H3_L05177 {ECO:0000313|EMBL:GAI02723.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 106.0
  • Bit_score: 174
  • Evalue 7.20e-41
Glycine-rich RNA-binding protein GRP1A id=3012495 bin=GWC1_OD1_38_17 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 109.0
  • Bit_score: 150
  • Evalue 7.90e-34
rbpA; RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 103.0
  • Bit_score: 117
  • Evalue 2.70e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 315
ATGGCAAAGAAATTATACGTAGGCGGGCTGTCATATGACACCACCGACGCGACTTTAAAAGAGACTTTCGCCAAAGCCGGAACCGTTGAATCGGCAACCATTATTACTGATAGAATGTCCGGTCGTTCAAAGGGATTCGGTTTTGTGGAAATGTCATCTGACGAAGAAGCGGCAAAAGCGATTGAAATGTTCAGCGGCAAAGAGCTTGATGGGCGGAGTATTACTGTTAATGAAGCTCGGCCAATGGAGCCGCGTCCCCGACAAGGCGGGTTTGACCGCGGGGGATATGGCGGCGAACGGAGAAAGAAATGGTAG
PROTEIN sequence
Length: 105
MAKKLYVGGLSYDTTDATLKETFAKAGTVESATIITDRMSGRSKGFGFVEMSSDEEAAKAIEMFSGKELDGRSITVNEARPMEPRPRQGGFDRGGYGGERRKKW*