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Ig5771_Miz_0z4_300_2015_Actinobacteria_64_6

ig5771_Bacteria_64_6
In projects: 09MI20_z4_2015  |  mizunami_genomes

Consensus taxonomy: Bacteria

Taxonomy override: Actinobacteria

Description

Intersect_Ig5771.032_&_Ig5771.043

Displaying items 51-100 of 391 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
Ig5771_scaffold_9268
Species: BJP_IG2158_Actinobacteria_57_21 (100%)
3 3236 bp 65.36 5.70 100.22
Ig5771_scaffold_10905
Species: BJP_IG2158_Actinobacteria_57_21 (100%)
3 2833 bp 64.31 5.45 92.87
Ig5771_scaffold_8929
Species: BJP_IG2158_Actinobacteria_57_21 (66.67%)
3 3339 bp 67.15 6.29 92.00
Ig5771_scaffold_4114
Domain: Bacteria (66.67%)
3 6324 bp 65.31 4.91 96.96
Ig5771_scaffold_7870
Domain: Bacteria (100%)
3 3702 bp 64.78 6.24 93.68
Ig5771_scaffold_9031
Phylum: Chloroflexi (66.67%)
3 3304 bp 62.59 4.95 85.08
Ig5771_scaffold_10664
Domain: Bacteria (66.67%)
3 2883 bp 66.53 4.99 97.29
Ig5771_scaffold_10170
Species: BJP_IG2158_Actinobacteria_57_21 (100%)
3 2999 bp 63.19 5.00 67.92
Ig5771_scaffold_8197
Species: BJP_IG2158_Actinobacteria_57_21 (100%)
3 3583 bp 62.94 5.86 95.45
Ig5771_scaffold_9822
Species: Peptococcaceae bacterium BRH_c4b (66.67%)
3 3085 bp 63.11 6.13 98.02
Ig5771_scaffold_9323
Domain: Bacteria (66.67%)
3 3218 bp 65.66 6.34 95.37
Ig5771_scaffold_9077
Species: RBG_13_Actinobacteria_55_18_curated (66.67%)
3 3291 bp 61.87 5.65 92.89
Ig5771_scaffold_7923
Species: BJP_IG2158_Actinobacteria_57_21 (66.67%)
3 3680 bp 66.39 5.54 83.40
Ig5771_scaffold_12678
Species: BJP_IG2158_Actinobacteria_57_21 (66.67%)
3 2501 bp 64.61 6.24 92.24
Ig5771_scaffold_7935
Order: Coriobacteriales (66.67%)
3 3676 bp 66.35 5.88 53.94
Ig5771_scaffold_10474
Domain: Bacteria (66.67%)
3 2922 bp 64.58 5.49 89.73
Ig5771_scaffold_10730
Domain: Bacteria (100%)
3 2871 bp 61.93 5.69 85.79
Ig5771_scaffold_9098
Species: RBG_13_Actinobacteria_55_18_curated (66.67%)
3 3283 bp 63.69 6.63 86.26
Ig5771_scaffold_9610
Domain: Bacteria (66.67%)
3 3137 bp 61.65 5.45 91.42
Ig5771_scaffold_10476
Species: BJP_IG2158_Actinobacteria_57_21 (66.67%)
3 2922 bp 64.27 5.44 94.76
Ig5771_scaffold_5861
Species: BJP_IG2158_Actinobacteria_57_21 (66.67%)
3 4709 bp 61.44 4.71 97.15
Ig5771_scaffold_11815
Species: BJP_IG2158_Actinobacteria_57_21 (100%)
3 2652 bp 65.46 4.81 95.14
Ig5771_scaffold_9360
Species: BJP_IG2158_Actinobacteria_57_21 (66.67%)
3 3207 bp 62.21 5.85 87.56
Ig5771_scaffold_8252
Species: BJP_IG2158_Actinobacteria_57_21 (66.67%)
3 3565 bp 63.51 5.72 95.76
Ig5771_scaffold_11058
Species: BJP_IG2158_Actinobacteria_57_21 (66.67%)
3 2803 bp 58.62 4.98 90.12
Ig5771_scaffold_8528
Domain: Bacteria (66.67%)
3 3469 bp 62.41 5.49 85.79
Ig5771_scaffold_10253
Domain: Bacteria (66.67%)
3 2980 bp 64.93 5.18 82.25
Ig5771_scaffold_10768
Species: BJP_IG2158_Actinobacteria_57_21 (100%)
3 2863 bp 62.94 4.51 97.76
Ig5771_scaffold_12219
Species: RBG_13_Actinobacteria_55_18_curated (66.67%)
3 2579 bp 63.71 6.11 96.20
Ig5771_scaffold_11085
Domain: Bacteria (66.67%)
3 2797 bp 60.21 4.34 95.35
Ig5771_scaffold_12478
Domain: Bacteria (66.67%)
3 2532 bp 68.64 5.51 90.40
Ig5771_scaffold_7728
Domain: Bacteria (100%)
3 3766 bp 61.05 6.81 81.25
Ig5771_scaffold_9664
Domain: Bacteria (66.67%)
3 3127 bp 63.90 6.67 89.41
Ig5771_scaffold_6338
Species: BJP_IG2158_Actinobacteria_57_21 (75%)
4 4438 bp 65.05 5.17 66.38
Ig5771_scaffold_8811
Species: BJP_IG2158_Actinobacteria_57_21 (50%)
4 3370 bp 63.65 4.32 87.42
Ig5771_scaffold_8044
Species: BJP_IG2158_Actinobacteria_57_21 (100%)
4 3635 bp 65.12 6.73 90.45
Ig5771_scaffold_8557
Species: RBG_13_Actinobacteria_55_18_curated (75%)
4 3459 bp 63.80 4.90 94.80
Ig5771_scaffold_6088
Species: BJP_IG2158_Actinobacteria_57_21 (100%)
4 4571 bp 65.54 6.07 94.44
Ig5771_scaffold_9673
Species: RBG_13_Actinobacteria_55_18_curated (75%)
4 3125 bp 63.49 6.10 89.38
Ig5771_scaffold_5415
Species: BJP_IG2158_Actinobacteria_57_21 (50%)
4 5044 bp 66.49 5.59 87.79
Ig5771_scaffold_3854
Domain: Bacteria (50%)
4 6640 bp 62.48 8.56 73.51
Ig5771_scaffold_4782
Species: BJP_IG2158_Actinobacteria_57_21 (100%)
4 5614 bp 63.86 5.50 92.13
Ig5771_scaffold_4528
Species: BJP_IG2158_Actinobacteria_57_21 (100%)
4 5853 bp 62.29 5.20 92.00
Ig5771_scaffold_6114
Species: BJP_IG2158_Actinobacteria_57_21 (75%)
4 4559 bp 65.23 7.11 96.73
Ig5771_scaffold_4027
Species: BJP_IG2158_Actinobacteria_57_21 (75%)
4 6418 bp 64.93 5.54 92.97
Ig5771_scaffold_9455
Species: BJP_IG2158_Actinobacteria_57_21 (50%)
4 3180 bp 58.84 5.66 89.34
Ig5771_scaffold_12025
Species: BJP_IG2158_Actinobacteria_57_21 (75%)
4 2612 bp 66.50 4.71 95.79
Ig5771_scaffold_10072
Species: RBG_13_Actinobacteria_55_18_curated (50%)
4 3022 bp 62.71 5.51 97.68
Ig5771_scaffold_6907
Species: BJP_IG2158_Actinobacteria_57_21 (75%)
4 4126 bp 64.91 5.45 93.29
Ig5771_scaffold_7802
Species: BJP_IG2158_Actinobacteria_57_21 (50%)
4 3733 bp 65.31 6.19 91.45
Displaying items 51-100 of 391 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.