ggKbase home page

FFSP_062018_mid_0_1um_scaffold_620_2

Organism: FFSP_062018_mid_0_1um_Hydrogenophilales_62_23

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 6 ASCG 13 / 38 MC: 2
Location: comp(5028..6470)

Top 3 Functional Annotations

Value Algorithm Source
DEAD/DEAH box helicase; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] id=12494301 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 488.0
  • Bit_score: 827
  • Evalue 6.70e-237
DEAD/DEAH box helicase similarity KEGG
DB: KEGG
  • Identity: 85.8
  • Coverage: 486.0
  • Bit_score: 802
  • Evalue 5.00e-230
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 453.0
  • Bit_score: 832
  • Evalue 2.90e-238

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1443
ATGACTATTGAAACAAACACTGCCGGCCCGGCATTTGTCGAGCTCGGCCTGGCTGAACCCATTTTGCGTGCCATTCAGGACGCCGGCTACACCACGCCCACGCCGATCCAGGCGCAGGCAATCCCGCAGGTGCTGGCAGGCGGCGACCTGCTCGCCGCCGCGCAAACCGGCACTGGCAAGACCGCCGGCTTCACGCTGCCGATCCTGCATCATCTGTCGACGCGCGCCGTGCAGGCGCCCAAGCCGGGCCGCCCGCGCTGCCTGATTCTGGTACCGACGCGCGAACTCGCCGCGCAGGTCGAGGAATCGGTCAAGACGTACGGCAAATACCTGTCGCTCACCTCGATGGTGATGTTCGGCGGCGTCAACATCAATCCGCAGTTCAAGGCGCTGAAATCGCGCGTCGACATTCTGGTTTCCACGCCCGGCCGTCTGCTCGACCATCTGGGGCAGAAGACGGTGGACCTGTCCGGCGTTGAGATTTTCGTGCTCGACGAAGCCGACCGCATGCTGGATATGGGCTTCATCCGCGACATCAAGAAAGTACTCGCCGTGCTGCCCAAGCAGCGCCAGAACCTGCTGTTCTCGGCGACCTTCTCCGACGAAATCCGCACGCTGGCCAACGGCCTGCTGCACAACCCGAAGAGCGTCGAAGTCGCGCGCCGCAACACCACGGTCGAGGTCATCGAGCAATCGATGCACCGCGTGCCGCAGGCGCACAAGCGCGACTTGCTGGCGCACCTGATCAAGCACCATGACTGGCAGCAGGTGCTGGTGTTCACCCGCACCAAGCACGGCGCCAACAAGCTCGCCGAAAAGCTGATCAAGGACGGCATCACCGCCGCCGCGATTCACGGCAACAAGAGCCAGTCGGCGCGCACCAAGGCGCTGGCCAGCTTCAAGGACGGCAGCGTGCGCGTGCTGGTGGCGACCGACATCGCCGCGCGCGGCATCGACATCGACCAGCTGCCGCAGGTGGTGAACTTTGAACTGCCGAACGTGGCGGAAGACTACGTCCACCGCATCGGCCGCACCGGTCGTGCCGGCAGCACCGGCTCGGCGCTGTCGCTGGTGGACGACGAGGAAATGAGCTACCTGCGCGACATCGAGAAGCTGATCAAGCGCGCGATCGTGCGGGTCGAAATTGAACCCGGCTTCGTGCCGCCGACCAAGGCTGACCTGATGTCCGACGACCGTCCGCCGCGCCCGCCTCAGGGTCGCGGCGCGGCGCGTCAGGGGCAGAATGCAGGCCAGAGCCAGCCCGGCGGCGGCCGCAATGCCTCGGGACGCGCGCCGCAAGGCAAGCCCGCCGCAGGCAACGCCCAACCGGCGGCAAGCCGCGCTGCACCGACCCCGCATGGCACCACGCCGTCGAGCCAGCCGCGCAAGCCACGGCCGCAAGCGGCCTTGTTCTCGTCCAAACCAGGCACGCGCGGCCACTGA
PROTEIN sequence
Length: 481
MTIETNTAGPAFVELGLAEPILRAIQDAGYTTPTPIQAQAIPQVLAGGDLLAAAQTGTGKTAGFTLPILHHLSTRAVQAPKPGRPRCLILVPTRELAAQVEESVKTYGKYLSLTSMVMFGGVNINPQFKALKSRVDILVSTPGRLLDHLGQKTVDLSGVEIFVLDEADRMLDMGFIRDIKKVLAVLPKQRQNLLFSATFSDEIRTLANGLLHNPKSVEVARRNTTVEVIEQSMHRVPQAHKRDLLAHLIKHHDWQQVLVFTRTKHGANKLAEKLIKDGITAAAIHGNKSQSARTKALASFKDGSVRVLVATDIAARGIDIDQLPQVVNFELPNVAEDYVHRIGRTGRAGSTGSALSLVDDEEMSYLRDIEKLIKRAIVRVEIEPGFVPPTKADLMSDDRPPRPPQGRGAARQGQNAGQSQPGGGRNASGRAPQGKPAAGNAQPAASRAAPTPHGTTPSSQPRKPRPQAALFSSKPGTRGH*