ggKbase home page

SR1-18-Sp65_coassembly_scaffold_28044_2

Organism: SR1-18-Sp65_coassembly_Chloroflexi_56_22

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 15 / 38 MC: 3
Location: comp(350..1801)

Top 3 Functional Annotations

Value Algorithm Source
Transposase IS4 (Fragment) n=1 Tax=mine drainage metagenome RepID=T1A1Z9_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 35.8
  • Coverage: 478.0
  • Bit_score: 250
  • Evalue 2.60e-63
transposase IS4 family protein similarity KEGG
DB: KEGG
  • Identity: 22.2
  • Coverage: 351.0
  • Bit_score: 80
  • Evalue 1.30e-12
Tax=RifOxyB12_full_OP3_50_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 39.1
  • Coverage: 447.0
  • Bit_score: 301
  • Evalue 1.80e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RifOxyB12_full_OP3_50_7_curated → Omnitrophica → Bacteria

Sequences

DNA sequence
Length: 1452
ATGCCTCGCCGGAAGAAAGAAGAAGATGCCCCTGTCGTGCCGAAAGAAGCAAAGCGTCCCGTCCAGAAGAATCAGATCGTGGATTTGCTGGGCGTAGTCGACTGCTTGCACAGCATCCTGACTCCCAGCTTGTGCGAGAAGGTTTTCAGGAAGGTCCGCAACACAGAACGAGAGGGGGTTTGGACGCTGCACGCCCTGGTCGAGTTCTGGACCGCCATGAGGATCAAGGAACCCGTCTCGATCAAGCAAGGGGTGGAGGAAACTCGGAAAAGTCGGGGCCGAGACAAACTGTGGCCTCGGGTGATGGCGGAGACCAAGGCCTTTTACGATCGGTGTTATGCGCTGAGGCCGGACTTCTTCCAGGCGGTTTTCGATGCATTCATCGAACGTTTGGCGCCCGAAGCGCCCGCGACCTATGCCTCATGGATGACCTCGCTTCAGGAACAGTTCGCCCTGGTCTTGGTCGTCGACGGGTCGAAATTCGACGCCGTTGCTCACCGCCTCAAGCTCTTGTGGAACGAGCGCGGGGTGGTGCCGCCCGGTTGCATGACGGTCTTCTACGACCTGTTTCGAGGGATTCCGCGTCGGATATTCTTCTACGCGAACGCGGCCGAAGCGGAATTTACGCGGGCCATGGATTGCTTGGACTGGATTCCCAAAGGGACACTGCTGGTGGGAGACCGGCTCTACTGCTCGATCCAGTTCTTTGCCGCCCTGATCGCCGCGGGAATCCACGGGGTGTTTCGGCTCAACGGGACGGTCAAGCCCAGACGGATCAAAGTCATCGCCCGGCATCATGGGCGTCTGGAATTTTGGGAGGACGTTCTGGTGGAGGTTGGCGGCAGCAATGGCCTGCCCGTCCTCCAGCTTCGGTTGATCCGCTATCGCGGCCACGACATCAACGGCCGCCGGATACGCCGGGATATCTTGGTCAGCGTTTTGGACCCGAAGAAACTCACCGTCGAGCAGATTCTGATGCTCTATCGGTTGCGCTGGTCGATAGAACGGATGTTCTTTTCCCTCAAGGAGACTTTGAACCTGAGCGCCTTGTACGGTTGCCATCCCAACCTGGTGGCCATGCAGGCCTACACGACAGGCTTGGTGTACGCCGCCTTCCGCGTGGGCCAGGCCAAGATCGCCCAGCAGGCCAAAGTGCTGCCCGAACAAATTTCGCCGGCCAAGTTGTTTCCGCTGCTGGCGGAGGCGTCCGTTCGCTGGGCGGAGAGCCAGTTGGTGATGCTGGAGGTATCCCGCAGCAATCCTGGCGTTGCTTTGCGCGAGCCGAATTGGAAAAAGATGAAGTTCGCGTATGCTCGGCTGGGCAGCATTGTGGTGGAGACCCGTCGGGGTCGCCGGCGCAAGCGCCGCTTCTGTGCTTCGAGGAAACGCTGGAAGTCTATAGCTCATGTTCCAGGCGGACGCAAGTTCCTGCGTTTGGCCACCGTCGGTTAA
PROTEIN sequence
Length: 484
MPRRKKEEDAPVVPKEAKRPVQKNQIVDLLGVVDCLHSILTPSLCEKVFRKVRNTEREGVWTLHALVEFWTAMRIKEPVSIKQGVEETRKSRGRDKLWPRVMAETKAFYDRCYALRPDFFQAVFDAFIERLAPEAPATYASWMTSLQEQFALVLVVDGSKFDAVAHRLKLLWNERGVVPPGCMTVFYDLFRGIPRRIFFYANAAEAEFTRAMDCLDWIPKGTLLVGDRLYCSIQFFAALIAAGIHGVFRLNGTVKPRRIKVIARHHGRLEFWEDVLVEVGGSNGLPVLQLRLIRYRGHDINGRRIRRDILVSVLDPKKLTVEQILMLYRLRWSIERMFFSLKETLNLSALYGCHPNLVAMQAYTTGLVYAAFRVGQAKIAQQAKVLPEQISPAKLFPLLAEASVRWAESQLVMLEVSRSNPGVALREPNWKKMKFAYARLGSIVVETRRGRRRKRRFCASRKRWKSIAHVPGGRKFLRLATVG*