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SR1-18-Sp65_coassembly_scaffold_53170_28

Organism: SR1-18-Sp65_coassembly_Chloroflexi_56_22

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 15 / 38 MC: 3
Location: 20288..20950

Top 3 Functional Annotations

Value Algorithm Source
sigW; RNA polymerase sigma-W factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=5094366 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome similarity UNIREF
DB: UNIREF100
  • Identity: 35.9
  • Coverage: 184.0
  • Bit_score: 128
  • Evalue 5.20e-27
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 38.4
  • Coverage: 185.0
  • Bit_score: 116
  • Evalue 7.60e-24
Tax=RBG_16_Chloroflexi_56_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 42.9
  • Coverage: 191.0
  • Bit_score: 145
  • Evalue 5.80e-32

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Taxonomy

RBG_16_Chloroflexi_56_8_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 663
ATGTCGTTTTCAATTCCCGCCAGTCGCCCAAGCATATTTCTCGCGCTCGCGTCGAGCATGGACCGCGTGCGTGCGCGTTGGCGGGTCGCGCGCCCACGCACCCGCGAAACGGAAACCCACGCGCCCGACGATGCGACGTTGGCGGCAAAACACCTGGCGGGCGATCCGCACGCGTTTGCCGAATTGGTGAAACGGTACACGCGCGCGGTGTATCACGTTACGTATCGTTTCACCAACAACGCCGCGGACGCGGAAAATCTGACCCAAGAAACTTTTTTGCGCGCGTGGAATGCGCTGCCGCGCCTCGCGCTCGACAAACCGCTCAAACCGTATTTTGTAAAAATCGCGGTGAACTTGTGTCGCGATTGGGCGGCGCGCAATCGCGTGGAGCTTACACCGCTCGACGCGGACGACGAAACGATTTTTGCCGCCGACGCGCACGATCCTTTGCAAACCGTAAGCGATCAAGAACTGCGCGCACGCGTGCGCGCCAAGTTAGAGTTACTGCCGCCGTTGTATCGCACGGTGATTGCTTTGCGTTACGGTGAAGAAATGGCGTACGAAGAAATGGCGACCGCGTTGGAGATGCCTTTGAATACCGTACGTACGCATTTGCACCGCGCCAAAGCGCGCTTGCGCGAATTGTTGGAGCAAGACGAATGA
PROTEIN sequence
Length: 221
MSFSIPASRPSIFLALASSMDRVRARWRVARPRTRETETHAPDDATLAAKHLAGDPHAFAELVKRYTRAVYHVTYRFTNNAADAENLTQETFLRAWNALPRLALDKPLKPYFVKIAVNLCRDWAARNRVELTPLDADDETIFAADAHDPLQTVSDQELRARVRAKLELLPPLYRTVIALRYGEEMAYEEMATALEMPLNTVRTHLHRAKARLRELLEQDE*