ggKbase home page

SR1-18-Sp65_coassembly_scaffold_259398_11

Organism: SR1-18-Sp65_coassembly_Chloroflexi_60_13

near complete RP 47 / 55 BSCG 49 / 51 MC: 1 ASCG 11 / 38
Location: comp(11595..12977)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I4Q5_CALAS similarity UNIREF
DB: UNIREF100
  • Identity: 57.8
  • Coverage: 396.0
  • Bit_score: 435
  • Evalue 4.20e-119
sigA; RNA polymerase sigma factor SigA similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 396.0
  • Bit_score: 435
  • Evalue 1.20e-119
Tax=RBG_16_Chloroflexi_56_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 461.0
  • Bit_score: 817
  • Evalue 7.10e-234

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Chloroflexi_56_8_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 1383
ATGGCGAAGAAAAAAAGGCCTGGTTCTTCGAAAGCGCATTTGCGGAATTCATCTAAAAAGAAATCCAAGGTTTTGACCCTGGCCGCGGCCCTGCAAGGCGGTCGCGCCGACGCGGCTTGGGCGCGCGCCGCCGATTTGCCGGATCAAGATGCGGCGCTGGATTTGCTCGTCAAAAAGGCCGGACCGCACAAGCGACTGACATTGGAGCAAATCCGCTCGGTCTTTCCGGAAATCGAAGAGGACCCGGATCAGATCACCGATTTGCGCCGCTTGCTGGCCGAAATGCGCATCAAGGTCGTGGCGAACGGCGCACAGCCGATCCGCGAGCCGGAAGAGGAGAGCGAACCCACCGAGGAGATCGTCGTCAAGACCACCCTCGAGCTGCCCGGCGAGGTCGCGAGCGACCCGGTGCGAATGTACTTGCGCGAGATTGGGCGCGTGCCGCTGTTGAATTCGGATGACGAATCGCGTCTCGCCAAGGACATGAACGAGGGCGAAAAGGCCCAGCAATCGCTGCAACGCGCGACCAATCCCAAGGCACTGCAACGCCATAAGACGAAAATCGCCGCGGCCGAGACGGCGCGCACGCGTTTGGCCGAAGCGAACTTGCGTTTGGTCGTCAGCGTCGCCAAGCGGTACATCGGGCGCGGCATGTCGTTCCTCGATTTGATTCAAGAGGGGAACATCGGCCTCTTGCGCGCGGTCGAGCGTTACGATTACTCGAAGGGATTCAAGTTCTCCACGTACGCGACCTGGTGGATTCGCCAAGCGATCACGCGGGCAATTGCCGATCAGGCTCGCACGATTCGCATCCCCGTTCACATGGTCGAAACGATCAACCGGCTGATTCGCGTGTCCCGGCGCTTGACCCAGGAATTGGGACGCGAGCCGACGTCGGATGAGATCGCGCTCGAGATGGACATTCTGCCGGTCGAAGACCGCCGCGCGATTCTAGAGGCGCAGGCCGAAGGCGAGTCGCTCGAGCCGGGGCTTGAGCGGCGATTGAAACGCGCGGCGCTCAAAGTGCGGCGCATTCTCAAAGTCGCGCAAGAGCCAATGTCGCTCGAAACGCCGATTGGCACCGAGGAGAATTCCTCCCTCGGCGATTTCATCGAAGACGAATCCGTGCCCGGGCCGGTGGACCAGGCCTCGCGCCAATTGCTCAAAGAGCAGATGCAGGATGTGCTCGACGGGTTGAGCGCGCGCGAGCGCGAGGTGCTCGAACTGCGTTTCGGCCTGCGCGATGGGCAGACGCGCACGCTCGAAGAAGTGGGGCAGGCGTTCGGCGTCACGCGCGAGCGCATCCGCCAGATCGAAGCCAAGGCGCTCCGCAAACTGCGGCATCCGATTCGCAGCCGCAAGCTGAAGGATTATTTAGGGTGA
PROTEIN sequence
Length: 461
MAKKKRPGSSKAHLRNSSKKKSKVLTLAAALQGGRADAAWARAADLPDQDAALDLLVKKAGPHKRLTLEQIRSVFPEIEEDPDQITDLRRLLAEMRIKVVANGAQPIREPEEESEPTEEIVVKTTLELPGEVASDPVRMYLREIGRVPLLNSDDESRLAKDMNEGEKAQQSLQRATNPKALQRHKTKIAAAETARTRLAEANLRLVVSVAKRYIGRGMSFLDLIQEGNIGLLRAVERYDYSKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINRLIRVSRRLTQELGREPTSDEIALEMDILPVEDRRAILEAQAEGESLEPGLERRLKRAALKVRRILKVAQEPMSLETPIGTEENSSLGDFIEDESVPGPVDQASRQLLKEQMQDVLDGLSAREREVLELRFGLRDGQTRTLEEVGQAFGVTRERIRQIEAKALRKLRHPIRSRKLKDYLG*