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SR2-18-B1_coassembly_31103

Search features with annotation key words

Displaying items 31-60 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR2-18-B1_coassembly_31103_30
unknown

Not on your lists

33175..33870
-----------------
DNA (696bp)
protein (232aa)

This feature has no annotations

SR2-18-B1_coassembly_31103_31
Pectobacterium carotovorum, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(33953..34252)
-----------------
DNA (300bp)
protein (100aa)
transcriptional regulator n=1 Tax=Erwinia carotovora RepID=UPI0001A43029
Transcriptional regulator {ECO:0000313|EMBL:KGA23304.1}; TaxID=180957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium carotovorum subsp. brasiliense.;"
putative transcriptional regulator, XRE family
SR2-18-B1_coassembly_31103_32
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34371..34799
-----------------
DNA (429bp)
protein (143aa)
Endonuclease-like protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AZN7_9PROT
endonuclease-like protein
Endonuclease-like protein {ECO:0000313|EMBL:BAN33977.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
SR2-18-B1_coassembly_31103_33
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34792..35463
-----------------
DNA (672bp)
protein (224aa)
hypothetical protein n=1 Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI00035EBA2C
Sel1 domain protein, repeat-containing protein
Tax=BJP_IG2158_Rhodobacterales_64_37
SR2-18-B1_coassembly_31103_34
Methylophilaceae bacterium 11, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35634..36137)
-----------------
DNA (504bp)
protein (168aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI0003720B22
Uncharacterized protein {ECO:0000313|EMBL:EUJ11279.1}; Flags: Precursor;; TaxID=1101195 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacterium 11.;"
SR2-18-B1_coassembly_31103_35
unknown

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36550..37020
-----------------
DNA (471bp)
protein (157aa)

This feature has no annotations

SR2-18-B1_coassembly_31103_36
unknown

Not on your lists

comp(37088..37495)
-----------------
DNA (408bp)
protein (136aa)

This feature has no annotations

SR2-18-B1_coassembly_31103_37
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

37744..38238
-----------------
DNA (495bp)
protein (165aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
SR2-18-B1_coassembly_31103_38
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(38462..39154)
-----------------
DNA (693bp)
protein (231aa)
hypothetical protein n=1 Tax=Cohnella laeviribosi RepID=UPI000374708E
type 11 methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
SR2-18-B1_coassembly_31103_39
unknown

Not on your lists

comp(39186..39542)
-----------------
DNA (357bp)
protein (119aa)

This feature has no annotations

SR2-18-B1_coassembly_31103_40
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(39565..40104)
-----------------
DNA (540bp)
protein (180aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00036B72D2
putative cytochrome c
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
SR2-18-B1_coassembly_31103_41
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(40115..40468)
-----------------
DNA (354bp)
protein (118aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PJ6_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
SR2-18-B1_coassembly_31103_42
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(40465..41277)
-----------------
DNA (813bp)
protein (271aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
SR2-18-B1_coassembly_31103_43
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(41241..44507)
-----------------
DNA (3267bp)
protein (1089aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PJ8_SOLUE
CzcA family heavy metal efflux protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
SR2-18-B1_coassembly_31103_44
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(44500..45960)
-----------------
DNA (1461bp)
protein (487aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LL14_SYNFM
RND family efflux transporter MFP subunit
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
SR2-18-B1_coassembly_31103_45
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(45972..47288)
-----------------
DNA (1317bp)
protein (439aa)
Outer membrane efflux protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PK0_SOLUE
outer membrane efflux protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
SR2-18-B1_coassembly_31103_46
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

47556..48359
-----------------
DNA (804bp)
protein (268aa)
Slt family transglycosylase; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] id=15193108 bin=GWC2_NOV_55_46 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
soluble lytic murein transglycosylase
Tax=GWC2_Ignavibacteria_rel_36_12_curated
SR2-18-B1_coassembly_31103_47
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

48298..49485
-----------------
DNA (1188bp)
protein (396aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Periplasmic sensor signal transduction histidine kinase id=4561445 bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
sensor histidine kinase
SR2-18-B1_coassembly_31103_48
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

49482..50852
-----------------
DNA (1371bp)
protein (457aa)
acetoacetate metabolism regulatory protein AtoC n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B7A552
Fis family transcriptional regulator
Tax=GWF2_Verrucomicrobia_62_7_curated
SR2-18-B1_coassembly_31103_49
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

50969..51676
-----------------
DNA (708bp)
protein (236aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AXY1_HERA2
integral membrane sensor signal transduction histidine kinase
SR2-18-B1_coassembly_31103_50
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(51708..52709)
-----------------
DNA (1002bp)
protein (334aa)
von Willebrand factor, type A n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INP3_KORVE
von Willebrand factor A
von Willebrand factor, type A {ECO:0000313|EMBL:ABF41507.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
SR2-18-B1_coassembly_31103_51
unknown

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53141..53506
-----------------
DNA (366bp)
protein (122aa)

This feature has no annotations

SR2-18-B1_coassembly_31103_52
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

53523..54131
-----------------
DNA (609bp)
protein (203aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000363549D
redoxin domain-containing protein
Redoxin domain protein {ECO:0000313|EMBL:ABJ85092.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_31103_53
unknown

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comp(54091..54363)
-----------------
DNA (273bp)
protein (91aa)

This feature has no annotations

SR2-18-B1_coassembly_31103_54
unknown

Not on your lists

54596..54847
-----------------
DNA (252bp)
protein (84aa)

This feature has no annotations

SR2-18-B1_coassembly_31103_55
unknown

Not on your lists

54865..55224
-----------------
DNA (360bp)
protein (120aa)

This feature has no annotations

SR2-18-B1_coassembly_31103_56
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55392..55811
-----------------
DNA (420bp)
protein (140aa)
Membrane protein-like protein n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZWB7_DESOH
hypothetical protein
Tax=BJP_IG2102_Syntrophobacterales_60_12
SR2-18-B1_coassembly_31103_57
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55833..57068
-----------------
DNA (1236bp)
protein (412aa)
Putative uncharacterized protein id=4835126 bin=GWC2_Syntrophobacterales_56_13 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=CG_Syntroph_01
SR2-18-B1_coassembly_31103_58
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

57080..57802
-----------------
DNA (723bp)
protein (241aa)
ABC transporter related protein n=1 Tax=Thermincola potens (strain JR) RepID=D5X9C9_THEPJ
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADG83033.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
SR2-18-B1_coassembly_31103_59
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(57786..58829)
-----------------
DNA (1044bp)
protein (348aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003821D40
glycosyl hydrolase, BNR repeat-containing protein
Glycosyl hydrolase, BNR repeat-containing protein {ECO:0000313|EMBL:AIE83777.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Displaying items 31-60 of 65 in total

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