ggKbase home page

SRVP18_trench_6_60cm_scaffold_5578_9

Organism: SRVP18_trench_6_60cm_Methanoperedens_41_6

near complete RP 22 / 55 MC: 3 BSCG 16 / 51 ASCG 31 / 38 MC: 1
Location: 6691..7338

Top 3 Functional Annotations

Value Algorithm Source
Shwachman-Bodian-Diamond syndrome protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B8W5_METTP similarity UNIREF
DB: UNIREF100
  • Identity: 63.8
  • Coverage: 207.0
  • Bit_score: 279
  • Evalue 2.30e-72
putative RNA-associated protein similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 207.0
  • Bit_score: 279
  • Evalue 6.60e-73
Tax=RBG_16_Euryarchaeota_41_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 207.0
  • Bit_score: 369
  • Evalue 1.80e-99

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sequences

DNA sequence
Length: 648
ATGGTTGCTCTTGATGAGTCCATAATTGCACGGCTCAAAACACACGGAAAGACTTTTGAAGTGTTCGTAGACCCTGAGGGATCATTGGCTCTTAAAAGGGGAGAACAGGTGAAAATTGAGGATATCCTGGCAGTGGAAGATGTGTTCTCAGATGCAAAAAATGGAGACCGCCCGGCAGAACAGGATGTCATCAATGCGTTCGGCACAACCGACGCATTACAGATAGCACAAAAAATCATTATCGACGGCGAGCTTCATCTTACAACTGAACAGAAAAAGAAGATACAGGATGAAAAGAAGACTCGTGTGATCAATATAATTGCCACAAACGCAATAAATCCCCAGACAAAGGGGCCGCATCCCCCCGCACGAATAGAAGCTGCAATGAATGAAGCGGGCGTGCATATCGACCCTATGAAAAACGTGGATGAACTGGTAGAAATCGCAATGAAAGCGATAAGACCTCTCATCCCGATACGATTTGAAGAGATAAAAATCGCTATTAAACTTCCTGCAGAATATGCCGCAAAAGCATATGGCAGCGTTGCCGGATTTGGCGCCCTGACAAAGCAGGAATGGCAGAACGACGGTTCGTGGATAGGTGTCATCACTATACCATCCCCGGTGATTTCTTATCAGACGATGTAA
PROTEIN sequence
Length: 216
MVALDESIIARLKTHGKTFEVFVDPEGSLALKRGEQVKIEDILAVEDVFSDAKNGDRPAEQDVINAFGTTDALQIAQKIIIDGELHLTTEQKKKIQDEKKTRVINIIATNAINPQTKGPHPPARIEAAMNEAGVHIDPMKNVDELVEIAMKAIRPLIPIRFEEIKIAIKLPAEYAAKAYGSVAGFGALTKQEWQNDGSWIGVITIPSPVISYQTM*