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SRVP18_trench_6_60cm_scaffold_6426_8

Organism: SRVP18_trench_6_60cm_Methanoperedens_41_6

near complete RP 22 / 55 MC: 3 BSCG 16 / 51 ASCG 31 / 38 MC: 1
Location: 6069..6572

Top 3 Functional Annotations

Value Algorithm Source
truD; tRNA pseudouridine synthase D (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 63.3
  • Coverage: 166.0
  • Bit_score: 218
  • Evalue 1.10e-54
Probable tRNA pseudouridine synthase D n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=TRUD_METBU similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 166.0
  • Bit_score: 218
  • Evalue 3.80e-54
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67 similarity UNIPROT
DB: UniProtKB
  • Identity: 81.3
  • Coverage: 166.0
  • Bit_score: 275
  • Evalue 2.80e-71

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Taxonomy

BJP_08E140C01_10KDA_Methanosarcinales_43_67 → Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 504
ATGCAAATGTTTCTGGATGCGTACCAGTCATATATTTTCAACCTGATATTGAGCCGCCGCATCGGATCAGGCATGTCGATACATGAGGCTTATGACGGAGACATCGTGTGTTTCAAGAACGAGATGGGATTGCCTGATACTTCACGGCTGCAGAAGGTCACGAATGATAATCTTGACGGGATAAATAACCTCATCAATAGGGGACGTGCTTTTGTCACGTCGCCTCTTGTCGGATATGAAACACAGTTCGCAGAAGGTGCAGCCGGGGAAATTGAGCACGCTGTCATTAAGGAATTGAACATTGACCTTGAGGGTTTCAAAGTTCCTGCCATGCCTGAATTATCGTCAAAGGGGCTGCGCAGGGAGATAATAGTTCCTTTTAAGCCTGAATTCAGTGTTGAAGAGGATGAATTAAATGCAGGGAAAACGAAAGTGGTGCTTGGATTTTCCTTACAGAAGGGAAGTTATGCGACCACTATCCTGAGAGAGTATATGAAGCTGTAG
PROTEIN sequence
Length: 168
MQMFLDAYQSYIFNLILSRRIGSGMSIHEAYDGDIVCFKNEMGLPDTSRLQKVTNDNLDGINNLINRGRAFVTSPLVGYETQFAEGAAGEIEHAVIKELNIDLEGFKVPAMPELSSKGLRREIIVPFKPEFSVEEDELNAGKTKVVLGFSLQKGSYATTILREYMKL*