ggKbase home page

SRVP18_trench_6_60cm_scaffold_16891_4

Organism: SRVP18_trench_6_60cm_Methanoperedens_41_6

near complete RP 22 / 55 MC: 3 BSCG 16 / 51 ASCG 31 / 38 MC: 1
Location: 1089..2933

Top 3 Functional Annotations

Value Algorithm Source
ABC-type multidrug transport system, ATPase and permease component n=1 Tax=Cylindrospermum stagnale PCC 7417 RepID=K9X449_9NOST similarity UNIREF
DB: UNIREF100
  • Identity: 52.2
  • Coverage: 596.0
  • Bit_score: 622
  • Evalue 4.20e-175
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:AKB14396.1}; TaxID=1434121 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina thermophila CHTI-55.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 593.0
  • Bit_score: 665
  • Evalue 6.00e-188
ABC-type multidrug transport system, ATPase and permease component similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 596.0
  • Bit_score: 622
  • Evalue 1.20e-175

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanosarcina thermophila → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1845
ATGAATGCTGAAAATGATTCCCCTTCAGCATCAGAAAACGGGAATATCGGGAACAGGGTAAAAAATTTTTTGAGTCTTCAACAAGCAGTAACACTCGTGTGGGAGAGTGCTCCCCGATTGACTTTGGCAAGCGCACTGCTGATCGCTGCCCAAGGTATCCTCCCCCTCGCAACCCTGTACCTGATGAAGCTGATTATTGATTCCGTCACTGCAGGCGAATCTTTTGGCGGGATTGAAAATCCGTTTAATGGAGTTATATTCCTTATCATCCTTTTCTCTTGCGTTATTTTACTCACCTTTTTCACACGCACCCTGTCAGCTTATGTCAACGAGAGCCAGGCGACTCTGACGACCGACCACATCCAGAATATCCTGCATGCAAAATCTGTTGAAGTAGATCTCGAGTATTATGAAAATCCAACCTACTACGATACTTTCTATCTGGCCCAGAGAGAGGCCATGATCAGGCCGACCCGGATCGTGAATGGGCTCTTCCAGGTTGGCCAGAGTGGAATCGCTATTCTTGCTTTGCTCTTTGTTCTTATCTCGTTTAACTGGCTGATAGTAATACTCCTGGCGATTGCGGTAGTTCCTGCAGCAGTTGTCCGCTGGAAATATGCCGACCAGATTTACCACTGGCGCAAAGATCGGACATCTCATGAGCGTCAGGCCTATTATTTTCACTGGATGCTTACCGATGAACGTCACGCGAAGGAAATACGGCTCTTTAATCTCGGTTCCGGATTTATGGATCGGCACCGTGACCTCCGAAATCAGCTCAGAAAAGAATACCTGGGAATCCTCGAAAAGAGGGCGGTAGCAGACCTTGTCGCACAACTTCTGAGCGTCCTGGCCCTGTTCTTCTCATTTTTATTTATTGCCTACAATACGTTCCAAGGCGCCATAACGCTTGGAGATCTGGTCCTTTATTTTGGGGCTATCCAGCAGAGTCAGATGTTCATGAACAATATCCTCACGGGTATGGCAGGATTATATGAAGATACGATATTTTTGACCAGCCTTCATGATTTTCTTGAACTGAAACCGAAAGTGAAAGAGCCGGTTCATCCAATCCCTGTTCCCGTTCCACTGAAAAAGGGTATTTCATTTGAACATCTGACATTTCGGTACCCTGGATCAGAATCAGCAGTCCTCACCGATATCAATCTCACCATCCCTCCCGGTAAGATTATTGCCCTCGTGGGGGAGAATGGTTCCGGGAAAACTACGCTTATCAAACTACTATGCAGATTATATGACCCGGTGTCCGGGAACATTACCTTTGATGGCATTGATATACGGGATTTCACAATCCTGGACCTCCGCCGGGAAATTAGCATTATTTTTCAGGACTATGCGCGATATAACCTTACAGCAAAGGAGAATATCATGTTCGGGAGTAGAGATCGCCCGGTTGAGGACGATCAGATCTACCAGGCAGCAGAGTCTGCTGGAGCGGACGTCGTTATCAACAAGCTGGAGCACCAATACGAAACACTCCTTGGTAAATTGTTTGATAGCGGAGCGGAGCTTAGTATCGGGGAATGGCAAAAGATTGCGTTAGCGAGGGCATTCATCCGTGATGCACAGATCATCATCATGGATGAACCGACTAGTGCGCTCGATCCATTTGCTGAAGCAGAAGTGATAGCCAAATTACAGACGATAGCAAAAGGACGCACTGCACTCATCATCAGCCACCGGCTTTCATCGGTCAGAACAACGGACTATATCTATTTCATGGAAGGCGGGAGAATTGTTGAGTCTGGAACACATGAAGGTCTTATCGCGTTGGGGGGAAAATATTATCACTTGTTTGAGACACAGGCTCGACAATATCGATGA
PROTEIN sequence
Length: 615
MNAENDSPSASENGNIGNRVKNFLSLQQAVTLVWESAPRLTLASALLIAAQGILPLATLYLMKLIIDSVTAGESFGGIENPFNGVIFLIILFSCVILLTFFTRTLSAYVNESQATLTTDHIQNILHAKSVEVDLEYYENPTYYDTFYLAQREAMIRPTRIVNGLFQVGQSGIAILALLFVLISFNWLIVILLAIAVVPAAVVRWKYADQIYHWRKDRTSHERQAYYFHWMLTDERHAKEIRLFNLGSGFMDRHRDLRNQLRKEYLGILEKRAVADLVAQLLSVLALFFSFLFIAYNTFQGAITLGDLVLYFGAIQQSQMFMNNILTGMAGLYEDTIFLTSLHDFLELKPKVKEPVHPIPVPVPLKKGISFEHLTFRYPGSESAVLTDINLTIPPGKIIALVGENGSGKTTLIKLLCRLYDPVSGNITFDGIDIRDFTILDLRREISIIFQDYARYNLTAKENIMFGSRDRPVEDDQIYQAAESAGADVVINKLEHQYETLLGKLFDSGAELSIGEWQKIALARAFIRDAQIIIMDEPTSALDPFAEAEVIAKLQTIAKGRTALIISHRLSSVRTTDYIYFMEGGRIVESGTHEGLIALGGKYYHLFETQARQYR*