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SRVP18_trench_6_60cm_scaffold_18013_6

Organism: SRVP18_trench_6_60cm_Methanoperedens_41_6

near complete RP 22 / 55 MC: 3 BSCG 16 / 51 ASCG 31 / 38 MC: 1
Location: comp(4861..5670)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 268.0
  • Bit_score: 381
  • Evalue 5.80e-103
tRNA pseudouridine synthase A n=1 Tax=uncultured archaeon RepID=Q2VP68_9ARCH similarity UNIREF
DB: UNIREF100
  • Identity: 54.6
  • Coverage: 269.0
  • Bit_score: 313
  • Evalue 1.40e-82
tRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 265.0
  • Bit_score: 301
  • Evalue 2.00e-79

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 810
ATGCGAATCGCCCTTAAAATAGCTTATATCGGAACGGATTACCATGGTTCACAGGTGCAGCCCGATGTAAAAACCATAGAAGGTGAACTTTTCAGGGCTCTTCGGGAATTGAATATCATCAATGATCCCCATGAGGCGAATTTTAGTGCGGCAGGAAGAACTGATAGTGGTGTCCATGCACTTGGCCAGGTAATAGCATTCGATACTGATAAACCCCATATTACGATACCAAGAGCAGTAAATAGCAAGTTACCCGGGACAATATGGGCATGGTCAAGAGCGCAGGTTCCTTCCGATTTTGACCCGCGGCGCAATGCAAAATACCGGGAATACAGGTATATAATATTCGGGAAATATGACCTTCCGCTATTCTTGAAAGCTTCGCGCCTGCTCACTGGAGAACATGATTTTTACAACTTCATAACGCCTGAAAAAGAACGCAGTAATATATGTAATATTGAGAAGCTCGAGATGCGGGATGCAGGGGAATGTACTATAATGGATATCAGGGCGGGCCATTTTCTCTGGCACATGGTAAGAAAAATTGCGGCGGCAATGAAAATGATAGTGGTGGGTGAAAAAGACTTGAGGTGGCTTGAAAAGATGTTAAATCCCTCTGAATTCAGAGAAGGGCTTGAACCTGCACCTGCTTACGGATTGGTTTTTAAAAATGTCGAATATGAGAATATAACCTGGGATGAGGATGCATATGCTAAAAAATCGATATCTAAAGCACTTGATGAGCACTTTTTGAGATACAGGGTAATGGCGCAGATGATTGAAGAACTCAAGAAAGGACTGGCAGATTAA
PROTEIN sequence
Length: 270
MRIALKIAYIGTDYHGSQVQPDVKTIEGELFRALRELNIINDPHEANFSAAGRTDSGVHALGQVIAFDTDKPHITIPRAVNSKLPGTIWAWSRAQVPSDFDPRRNAKYREYRYIIFGKYDLPLFLKASRLLTGEHDFYNFITPEKERSNICNIEKLEMRDAGECTIMDIRAGHFLWHMVRKIAAAMKMIVVGEKDLRWLEKMLNPSEFREGLEPAPAYGLVFKNVEYENITWDEDAYAKKSISKALDEHFLRYRVMAQMIEELKKGLAD*