ggKbase home page

SRVP18_trench_6_60cm_scaffold_22930_4

Organism: SRVP18_trench_6_60cm_Methanoperedens_41_6

near complete RP 22 / 55 MC: 3 BSCG 16 / 51 ASCG 31 / 38 MC: 1
Location: comp(1708..2346)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease HII n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KZ90_METHD similarity UNIREF
DB: UNIREF100
  • Identity: 59.6
  • Coverage: 213.0
  • Bit_score: 253
  • Evalue 1.00e-64
ribonuclease H, mammalian HI/archaeal HII subfamily similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 213.0
  • Bit_score: 253
  • Evalue 2.90e-65
Tax=RBG_16_Euryarchaeota_41_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.7
  • Coverage: 212.0
  • Bit_score: 307
  • Evalue 8.50e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sequences

DNA sequence
Length: 639
ATGATATCCGGGATAGATGAGGCAGGGAAAGGGCCGGTACTTGGCCCGATGTGCGTTGCAGGTGTTCTCATACATGAAACAAAAATAGATGTTCTTTCCCGGATAGGGGTCAGGGATTCAAAACAGCTAAGCCCCAAACGGCGCGAAGTTCTTGCTGAGGATATCAAAAAAATCGCTGAAAAATATTTTATTCTTGAGGTCAGCCCTTTCCAGATTGATGAACTTCGAAAGATAATGACAATGAATGAAATAATGGTGTTATGCTATTCCAGGGTACTTGAAGAACTCAAGCCCAAGCATGCCTTTGTGGACGCTGCGGACGTTATTGCAGAACGATTCGGGGAAAATCTCAGAACGAGATATTCCGGGGATATTATGATCACTTCGGAACATCAGGCAGATGTCAAATATCCTATCGTATCGGCAGCCTCCATCCTTGCAAAAGTGCAAAGGGACATGCTGGTAAAACAACTGGGAGAAAATACAGGCGTGGATATAGGAAGCGGTTATCCCGTCGACCAAAAAACTATCAGTTTCCTTGAGGGATGGGTCCAGGAACATGGTTCGCTTCCTTATTTTGCGAGAAGTTCATGGGAGACTTCAAAAAGGATACTTGAGAAATTCAATAATGGAGAATAG
PROTEIN sequence
Length: 213
MISGIDEAGKGPVLGPMCVAGVLIHETKIDVLSRIGVRDSKQLSPKRREVLAEDIKKIAEKYFILEVSPFQIDELRKIMTMNEIMVLCYSRVLEELKPKHAFVDAADVIAERFGENLRTRYSGDIMITSEHQADVKYPIVSAASILAKVQRDMLVKQLGENTGVDIGSGYPVDQKTISFLEGWVQEHGSLPYFARSSWETSKRILEKFNNGE*