ggKbase home page

SRVP18_trench_6_60cm_scaffold_23597_1

Organism: SRVP18_trench_6_60cm_Methanoperedens_41_6

near complete RP 22 / 55 MC: 3 BSCG 16 / 51 ASCG 31 / 38 MC: 1
Location: comp(1..930)

Top 3 Functional Annotations

Value Algorithm Source
gyrA suspected. See adjacent gene [SRVP18_trench_6_60cm_scaffold_23597_2]. split_gene in-house
  • Identity: null
  • Coverage: null
  • Bit_score: null
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 307.0
  • Bit_score: 518
  • Evalue 6.00e-144
DNA gyrase subunit A similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 309.0
  • Bit_score: 375
  • Evalue 7.50e-102

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 930
ATGAAGGGCAAGACACCTGATGAAGCCCGCGACGGTCTTGTAGCGAAGTTCAGTTTGAGTGTTGAGCAGGCAAAAGCCATACTTGACATGAGGCTCCAGAGGCTCACGGGTCTTGAGCGCGAGAAGATCGATGCTGAATACGGTGAGCTCCAAAAAACAATAGCTTGGCTCAAGGAACTCCTGGCAAGTGAAATAAAAATACTCGCGGTCATAAAAGAAGAACTCGCAGATATCAAAGCCCGATTTTCTAATAAGAGGCGGACCGAGATAATTGAAAGTACCGGGGACCTTATTACTGAGGACTTAATTCCGAAAGAAGATGATGTCATTACGATCACCAACAGCGGCTACATAAAACGAATCGCTGTGGATGCATATAAACAGCAGCGCCGCGGTGGGAAGGGCGTCATGGGCATGGAGACCAAGGAAGAGGATTTCGTAAGCGACCTCTTTATTGGCAATACTCACGATTACCTCCTGTTCTTTACCGACAAAGGCAAGGTTTACTGGCTTAAAGTATATGGGATACCCGAAGCGGGAAGGCAGGCGCGCGGCACAGCGATAGTCAACCTGCTTCAGCTTGAGCAGGACGAAAAGATCAACGCTTATATTCCCATCAGCAAGTTTGACGAGAAACACTATCTTTTGATGGTCACAAAGAAAGGTACAGCTAAGAAGACACAGCTTACTGATTTTTCAAATCCCAGGAAAACCGGGATAATTGCCATATCTCTTGATGAAGGGGATAAACTTGTGTCCGTAAAGCTCACGGATGGGACAAAAGAAGCAGTTATCGGCACAAAGCACGGGAAAGCCATCAGGTTCAACGAGAATGATGTGAGGGATATGGGGCGCGGCGCATACGGTGTGAGAGGCATAAGGCTTGTTGGTGAGGATGAAGTAGTAAGCATGGCAGTTGTGGAGGAGGGC
PROTEIN sequence
Length: 310
MKGKTPDEARDGLVAKFSLSVEQAKAILDMRLQRLTGLEREKIDAEYGELQKTIAWLKELLASEIKILAVIKEELADIKARFSNKRRTEIIESTGDLITEDLIPKEDDVITITNSGYIKRIAVDAYKQQRRGGKGVMGMETKEEDFVSDLFIGNTHDYLLFFTDKGKVYWLKVYGIPEAGRQARGTAIVNLLQLEQDEKINAYIPISKFDEKHYLLMVTKKGTAKKTQLTDFSNPRKTGIIAISLDEGDKLVSVKLTDGTKEAVIGTKHGKAIRFNENDVRDMGRGAYGVRGIRLVGEDEVVSMAVVEEG