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cn_combo_scaffold_1005_25

Organism: CN-SCN_Cytophagaceae_12x

partial RP 39 / 55 BSCG 38 / 51 ASCG 12 / 38
Location: 26912..27478

Top 3 Functional Annotations

Value Algorithm Source
Collagen triple helix repeat-containing protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EUI7_EMTOG similarity UNIREF
DB: UNIREF100
  • Identity: 32.9
  • Coverage: 164.0
  • Bit_score: 93
  • Evalue 2.10e-16
Collagen triple helix repeat-containing protein {ECO:0000313|EMBL:AFK03340.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" s UNIPROT
DB: UniProtKB
  • Identity: 32.9
  • Coverage: 164.0
  • Bit_score: 93
  • Evalue 2.90e-16
Collagen triple helix repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 32.9
  • Coverage: 164.0
  • Bit_score: 93
  • Evalue 5.90e-17

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Taxonomy

Emticicia oligotrophica → Emticicia → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 567
TTGACAATATTCATGACGAGTAAATTCAGCGTATTTCAGGTTTTCTTTTTCGTTCTGGCGGTTCTGACTCTTCAAAGCTGTGAAGGTCCCGAAGGTCCTGCAGGTAAAGACGGCATAGGTACCCAGGGGCCAAAAGGCGAGCCGGGAGAGCCGGGAACGGCCAATGTCATCTACTCCGACTGGAAGTCCGTCAATACCGCCGCATGGGTAAAGACTACGACAAACGGCCTCGTCAGGTACCAGTACGATATGACGGCTCCACCTCTCGATCAGGCCATCCTCGAACGCGGGCTGGTGCTGGTATATGTAAAGCTGACCCAGGATGACAACCAGGTACGTCCGCTGCCCTACGTCGTTACCAGTAACCTTACGCAGGTACGCCTCGAATTTTCCCTGCTGGAGAAAAAGGTACGCCTTCTGAGCACCGATCCCGACCAGGGCCGCAACCTGACCGCGCCTGACGGCCAGTACCGGTACGTCATCGTGCCCGGCAGCCAGGCAGGTCGCATAGCCGGCGGCCCGTTGTCTTACGAAGACGCGGTAAGGCTCTTCAACCTGCCTGACTAA
PROTEIN sequence
Length: 189
LTIFMTSKFSVFQVFFFVLAVLTLQSCEGPEGPAGKDGIGTQGPKGEPGEPGTANVIYSDWKSVNTAAWVKTTTNGLVRYQYDMTAPPLDQAILERGLVLVYVKLTQDDNQVRPLPYVVTSNLTQVRLEFSLLEKKVRLLSTDPDQGRNLTAPDGQYRYVIVPGSQAGRIAGGPLSYEDAVRLFNLPD*