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cn_combo_scaffold_1098_27

Organism: CN-SCN_Cytophagaceae_12x

partial RP 39 / 55 BSCG 38 / 51 ASCG 12 / 38
Location: comp(36416..37315)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix-domain containing protein AraC type n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XYN2_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 51.6
  • Coverage: 285.0
  • Bit_score: 310
  • Evalue 1.70e-81
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 285.0
  • Bit_score: 310
  • Evalue 4.90e-82
Helix-turn-helix-domain containing protein AraC type {ECO:0000313|EMBL:ACU04514.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 51.6
  • Coverage: 285.0
  • Bit_score: 310
  • Evalue 2.40e-81

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Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 900
ATGAAAGTAATTTTCGAGCATCAGTCCCACCCCTCCGGGCTTGGATTCCTGGTGAAGGAGTACGTACAGACCTACTTTACATCGCCTTTTCATTTCCACGATCTCTATGAGCTGATCCTGATCAGGAAAAGTCACGGCAAGCTCTATGCGGGAAGGAAGATCATGAACTTCCAGGACGGGGATATCTTTCTTTTCGGGCCGGGGTTCGGTCATTGCTTTTACAATGAAAGGTCGTTTATCGATTCCGGTGAAATGGCGCAGGCCGTCGCTGTTTTTTTCCGGGAAGATTTCCTGGGCAGCGGCTTTTTCGATAACGTCAATTATGTAAAGGTGAAGAACCTGCTCAGGAAATCGGCCTACGGGATACAGGTGAGGCGGAATGATGGCCCGCTGCATGAGCTTTTCTCGAAAATTACGCGGCAGCAGGGAATGGACGAGCTGATCTCGTTCCTGCGTATGCTGAGCCACGTATCATCCCTGACAGACGCGGAGCTGGAGGTCATGAACGAAACGCAGTCTGTCATGAAGCTGACCAACAGGGATTCCGCGCGCCTGGAGCCGGTCATGAAATATGTCATAGAAAACTTCAAGGACGAGCTCGACAGCCGGAAGGCGGCAGAGCTGATGCATCTGAATGAGGCTGCCTTCTGCAGGTATTTCAAGCGGAGGATGGAGCAGACTTTCTCCCAATTCGTAAATAACGTGAGAGTTACCCACGCCGTCAACCTGCTGCTGACCGAAGAATGGGATATATTACGTATCTGCTATGAATCGGGCTATAAAAACCTTTCCTACTTCAACCGGCAGTTCAGGGAAATAACCGGTAAAAGCCCGAAGGAATACCGGCGGGCGTTTAAAGGGACCGACGACAGCCTGGTAATGGATACGAAGGAAGACTGA
PROTEIN sequence
Length: 300
MKVIFEHQSHPSGLGFLVKEYVQTYFTSPFHFHDLYELILIRKSHGKLYAGRKIMNFQDGDIFLFGPGFGHCFYNERSFIDSGEMAQAVAVFFREDFLGSGFFDNVNYVKVKNLLRKSAYGIQVRRNDGPLHELFSKITRQQGMDELISFLRMLSHVSSLTDAELEVMNETQSVMKLTNRDSARLEPVMKYVIENFKDELDSRKAAELMHLNEAAFCRYFKRRMEQTFSQFVNNVRVTHAVNLLLTEEWDILRICYESGYKNLSYFNRQFREITGKSPKEYRRAFKGTDDSLVMDTKED*