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cn_combo_scaffold_1461_21

Organism: CN-SCN_Cytophagaceae_12x

partial RP 39 / 55 BSCG 38 / 51 ASCG 12 / 38
Location: comp(21735..22325)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0 similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 196.0
  • Bit_score: 279
  • Evalue 3.00e-72
peptide deformylase n=1 Tax=Dyadobacter beijingensis RepID=UPI000382E483 similarity UNIREF
DB: UNIREF100
  • Identity: 65.8
  • Coverage: 196.0
  • Bit_score: 282
  • Evalue 4.30e-73
def; peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 196.0
  • Bit_score: 279
  • Evalue 6.00e-73

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Taxonomy

Dyadobacter fermentans → Dyadobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 591
ATGATTTACCCGATTATCGCTTACGGCGACCCTATCCTCAGAAAAGTTACCCGTCCGGTTGCTGAAGGCGAGGTGGATATAAAGACGATCGCCGAAAATATGTTTGAAACCATGTACAATGCTTCGGGAGTAGGTTTGGCCGCTCCGCAGGTTGGCCTGGATATACGTATTTTCGTAGTCGACGGCTCTCCGATGGCAGATGACGAAGATGAAGAAAACGAAGGAGAACCGGAAAATCCGGAGCTGATCGGGTTCAAGAAAGTTTTTGTAAACCCGCAGATTATAGAGGAATCAGGCGATCCGTGGGCCTTCGAAGAGGGCTGTTTGAGTATTCCCGGCCTCAGGGCAGACGTTTTCCGCCCGGCCGAGATCAAAATCCGCTACCAGGACACCGACTGGAAAGTGCACGAAGAGGTGTTTGCCGGGATTGCGGCGCGTATCATCCAGCACGAATACGATCACCTGGAAGGCAAGCTCTTTGTAGACTACCTGCCTGCGCTGAAAAAACAGATGATCAGGAAGAAGCTCAGCAACATTTCAAAGGGAATCGTGGATGCAGATTACAGGATGAGGTTCTATAATAAAAAATAA
PROTEIN sequence
Length: 197
MIYPIIAYGDPILRKVTRPVAEGEVDIKTIAENMFETMYNASGVGLAAPQVGLDIRIFVVDGSPMADDEDEENEGEPENPELIGFKKVFVNPQIIEESGDPWAFEEGCLSIPGLRADVFRPAEIKIRYQDTDWKVHEEVFAGIAARIIQHEYDHLEGKLFVDYLPALKKQMIRKKLSNISKGIVDADYRMRFYNKK*