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cn_combo_scaffold_1461_28

Organism: CN-SCN_Cytophagaceae_12x

partial RP 39 / 55 BSCG 38 / 51 ASCG 12 / 38
Location: comp(30789..31925)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J3Q9_CYCMS similarity UNIREF
DB: UNIREF100
  • Identity: 54.0
  • Coverage: 365.0
  • Bit_score: 404
  • Evalue 1.40e-109
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 365.0
  • Bit_score: 404
  • Evalue 4.10e-110
  • rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AEL25265.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium similarity UNIPROT
DB: UniProtKB
  • Identity: 54.0
  • Coverage: 365.0
  • Bit_score: 404
  • Evalue 2.00e-109

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Taxonomy

Cyclobacterium marinum → Cyclobacterium → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1137
ATGAAATACCAGACACTTACAACATCCAGAATAATGCCGCTCAAGCCACATTTTGCTTTCCTGCTTCTCTTTTCTGTGCTATACTCCTGCCGGGAAAAGCCCGGCCCTGATTCGGAGGCTTCCGCTTCCGGCAGGTATTGCCTGGACTCCGCCTTCCGGGAACGCGTCGCTTTTGTAAAACCGGCCTATGAGAAGGTAACCGAAGGCATACACCTCACCGGCTCCATTGAAGCAAATCCCGATAAGGTGGTTTCGTTCGTGAGCCTGGTAAGCGGAGTAGTGACCGGCGTCAATTTCTCTATCGGGGACAGGGTACAGAAAGGACAGGTGCTCGCCGAAATGCAAAGCTCCGAGCTGAGCGCCCTCCAGTCGGAAATGGCTTCTCTCCGATCGAGGATTGCCGTCGCCGAAAACAGGCTAAAAGCGGCAAAAGCAATGTTTACCGACGGAGTATCATCCCAGAGAGACCTTCTCGAAGCCCAGAGCGAGCTCGACATCCTGCAGTCCGAATTGTCGAGGAACAACGCCAACCTGGGGCTTTACAGCGCGAGCGTTTCAAAGGGAGTATTCCAGATCAAAGCGCCCGTTTCCGGGATTATTACGCAGAAAGCCGTTACGACAGGGGCCCAGATATCGCCCGAAAGCGGGCCGCTGTTCACCATTTCGGACCTGAGCCGGATCTGGATCCTGGCCAACGTTTACGCCACCAACATCAAAGACGTATTCCCCGGGATGGAAGTAAGCATTACCACCCTTTCCTATCCCGACGAACAGTTTAAAGGAAAGATCAGCTCCGTTTCTTCGGTAATGGACGAAGAAGCCAAGGTGCTGAAGGCTAGGATAGAGCTGCCGAATACCGGCATGAAGCTGAAGCCCGGCATGCTGGTAGACATCAATGCTTTTAAGCCGGTCGACCAGACGGCCCTGAGCCTCCCGACCAGTTCGCTGGTTTTTGACGATAACCAGAACTACGTGGTAGTATATAAGAACGATTGCGAGCTCGCTATCCGGAAAGTCGGCATACTGACCTCCAATAACGGCACGACCTATCTTTCAGACGGGCCGGACACAACAGAAAGCATCATCTCGAAAAATCAGCTGCTCGTATTCGAACAACTAAAAAACTTCCAAAACTAA
PROTEIN sequence
Length: 379
MKYQTLTTSRIMPLKPHFAFLLLFSVLYSCREKPGPDSEASASGRYCLDSAFRERVAFVKPAYEKVTEGIHLTGSIEANPDKVVSFVSLVSGVVTGVNFSIGDRVQKGQVLAEMQSSELSALQSEMASLRSRIAVAENRLKAAKAMFTDGVSSQRDLLEAQSELDILQSELSRNNANLGLYSASVSKGVFQIKAPVSGIITQKAVTTGAQISPESGPLFTISDLSRIWILANVYATNIKDVFPGMEVSITTLSYPDEQFKGKISSVSSVMDEEAKVLKARIELPNTGMKLKPGMLVDINAFKPVDQTALSLPTSSLVFDDNQNYVVVYKNDCELAIRKVGILTSNNGTTYLSDGPDTTESIISKNQLLVFEQLKNFQN*