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cn_combo_scaffold_1461_29

Organism: CN-SCN_Cytophagaceae_12x

partial RP 39 / 55 BSCG 38 / 51 ASCG 12 / 38
Location: comp(31956..33251)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane efflux protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J3Q8_CYCMS similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 422.0
  • Bit_score: 451
  • Evalue 1.20e-123
outer membrane efflux protein similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 422.0
  • Bit_score: 451
  • Evalue 3.30e-124
  • rbh
Outer membrane efflux protein {ECO:0000313|EMBL:AEL25264.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cy similarity UNIPROT
DB: UniProtKB
  • Identity: 52.8
  • Coverage: 422.0
  • Bit_score: 451
  • Evalue 1.60e-123

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Taxonomy

Cyclobacterium marinum → Cyclobacterium → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1296
ATGCGCATCCTTTTTTGTCTCACACCTGTTCTTTTTGTCATTTGCGGTACGGGTAAAACCTTAGCGCAGGATACGCTGGAGCTAAGCCGGCAGGAATGTGAGGCGATCTTTCTAAAAGAAAACCTGCTTCTGATAGCCGAAAAGCTGGAGGTACCGAAAGCCGAGGCTGCCGTCCAGCAAGCCCGCTTATGGCCTAACCCCAATTTCACGCTCGACCAGGTAAATCTCTGGGCCACCAAAGGACAAACCGGCGGTCAGGAAGCCGTCCCTCCCCTGTTCGGGAATTTCGGCAGGAACCAGCAGTTCGGCTTCGAAGTACAGCAGCTGATACAGACCGCCCGTAAAAGAAGCAGGCTGGTTGCACTCGAGCAGGTCAATGCCGGAAAAGCGGCGCTCGGCTTCGACGAGCTTTTGCGTAACCTGAAAGTTGAATTAAGAAAAAACCTCACCAATCTCCAGTACCTGCAGCTGAAGGAAGAAATATATGCCCGCCAGGCAGCGTCAGTCAGCCAGCTGATGAAAGCATACCAGGCCCAGGCTGACCAGGGATACATCTCCCGGAGCGAGGTGATCAGGCTCAGGGCGCTCGAGCTCGAGATCAGCAGGAACATCAGTGAGATCGTCAGGCAAAATAATGAAGCCCAGAAAGAGCTTAAGCTGTGGCTGCGCCTGCCGCCCGCCACCCGCATCCGCCTTAAAGACACCGGTTTTGTCAGGAATATCGATTCCCTCCGCCGGTATACGGTGGCCGAGATCGCAGAGCAGGCAAGGCTGTCACGCCCCGATCTCCGGATAGCCGAGCTCGGAGAGACACACGCCAGTAGGCTTATCGACTACGAAAAAGCCAGGCGGGTTCCCGATCTGGCCCTGAAAGGCACTTATGACCGGAACGGTAACACAATGCTGAACTTCTTCGGCTTCGGCGTCACGATGGATCTCCCCCTGTTCGACAGGAACCAGGGCAATATCCGCCAGGCGCAGATCCAGGCCGACCAAAGCAGGAAGCTGGCAGAATACAAGTCGTCGGAGGTAGAAAATGAAGTAGCGCTGGCTTACAGCAACCTGCTCAACGCGCTGCAGCTTGCATCAAAAACCGACAGCGACTACGAAGCCGCCCTCGACGAAATGCTGCTGGCGCATACCCGCAATTTTATCAACCGGAACATGAGCATGCTGGAATTCCTGGACTTCATGAACGCCTACCTGGAAAACAAGCAGATCATACTGGAAGCCCGGAAATCGGTCAACGATCATGTCGAGGAGCTGAACTATTGCATAGGCCGGGATCTGCTTTAA
PROTEIN sequence
Length: 432
MRILFCLTPVLFVICGTGKTLAQDTLELSRQECEAIFLKENLLLIAEKLEVPKAEAAVQQARLWPNPNFTLDQVNLWATKGQTGGQEAVPPLFGNFGRNQQFGFEVQQLIQTARKRSRLVALEQVNAGKAALGFDELLRNLKVELRKNLTNLQYLQLKEEIYARQAASVSQLMKAYQAQADQGYISRSEVIRLRALELEISRNISEIVRQNNEAQKELKLWLRLPPATRIRLKDTGFVRNIDSLRRYTVAEIAEQARLSRPDLRIAELGETHASRLIDYEKARRVPDLALKGTYDRNGNTMLNFFGFGVTMDLPLFDRNQGNIRQAQIQADQSRKLAEYKSSEVENEVALAYSNLLNALQLASKTDSDYEAALDEMLLAHTRNFINRNMSMLEFLDFMNAYLENKQIILEARKSVNDHVEELNYCIGRDLL*