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cn_combo_scaffold_1577_8

Organism: CN-SCN_Cytophagaceae_12x

partial RP 39 / 55 BSCG 38 / 51 ASCG 12 / 38
Location: comp(12033..12623)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035C259F similarity UNIREF
DB: UNIREF100
  • Identity: 42.9
  • Coverage: 196.0
  • Bit_score: 163
  • Evalue 2.90e-37
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 38.6
  • Coverage: 189.0
  • Bit_score: 124
  • Evalue 2.50e-26
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEI47427.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithy similarity UNIPROT
DB: UniProtKB
  • Identity: 38.6
  • Coverage: 189.0
  • Bit_score: 124
  • Evalue 1.20e-25

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Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 591
ATGGCTTTCCGATACGGGCTTTACGATGATGAGCATTTATGGCAGCTGGTCCGGGACGACGCTGACCAGGAGGCCTTTGCGTGTCTTCACGAGCGCTATGCGGAAGACCTGTATCGCCTTGCCTACCGGAAAACGGGCCATGCAGACGTCTCGGAAGATATCGTCCAGGAACTTTTTATCGCGTTATGGATCCAGCGGTCGGAGATCAGCATCGTCCGTAACGTCAGGAATTATCTTTACACTTCCGTCAGGAACAGGGTAATATCCTTCCTGCGCGATGTCATGAGCTCGAAGACCACCTCGCTCAATGTCCTGTCGCTCGAAAATTCCGGTCATTTTTCAGGCAACGGCGTAGAGGAAAAGATCATCTACGAAGATACCAGGGACCGGTATGAGCAGATCCTGAATACGATCCCGGAGAGAAGCCGCACCGTTTTTGAATTGAGCCGCAACGGGCTTTCCAACAAAGAGATCGCCGCTTCCCTGAACGTGGTCGAGAAAACGGTAGAATTTCACATTACAAAATGCCTTAAGCTACTCAGGGAGAAGCTTATCCATATTCTTTTGATCCTGTTCCAGGTCATATCCTGA
PROTEIN sequence
Length: 197
MAFRYGLYDDEHLWQLVRDDADQEAFACLHERYAEDLYRLAYRKTGHADVSEDIVQELFIALWIQRSEISIVRNVRNYLYTSVRNRVISFLRDVMSSKTTSLNVLSLENSGHFSGNGVEEKIIYEDTRDRYEQILNTIPERSRTVFELSRNGLSNKEIAASLNVVEKTVEFHITKCLKLLREKLIHILLILFQVIS*