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cn_combo_scaffold_1596_23

Organism: CN-SCN_Cytophagaceae_12x

partial RP 39 / 55 BSCG 38 / 51 ASCG 12 / 38
Location: 23740..24354

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 n=2 Tax=Sphingobacterium spiritivorum RepID=C2G2V5_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 60.3
  • Coverage: 189.0
  • Bit_score: 236
  • Evalue 2.80e-59
Sigma-70 region 2 {ECO:0000313|EMBL:EFK56811.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium similarity UNIPROT
DB: UniProtKB
  • Identity: 60.3
  • Coverage: 189.0
  • Bit_score: 236
  • Evalue 3.90e-59
RNA polymerase, sigma-24 subunit, ecf subfamily similarity KEGG
DB: KEGG
  • Identity: 58.7
  • Coverage: 189.0
  • Bit_score: 234
  • Evalue 2.30e-59

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Taxonomy

Sphingobacterium spiritivorum → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 615
ATGCGCGCATGTTCGTCTGCCTGTATATACGAAAACGACATGAACCATTCAATGACCTTATCGATGCCTGAAAAGAGGTCGTTCAGCCTGCCGGAAACCGTCAAAAAGTACGGGATGCAACTGCTCGGTTTCATCAGGGGCAGGGTAAAGGTGGTGGAAGACGCGGAAGATATCCTGCAGGATGTCTGGTACCAGCTGGGAAGCCTGACCGACCCCGAAGAGATTGAAAGCATCAGCGGCTGGCTGTACAGGGTAGCGCGCAATAAAATTACGGACCGGTACCGGAAACAGAAAAACGAGCTGCTCGACGATCTGTTTTACGACGATGAAGAGGGAGAATTCAGCTTTGGGGACATCCTGCTGGCAGACGACAGCAACAACCCGGAGCTGTCCTTTTTTAAAGAGGTGTTCTGGAAGACTTTCCGGGAGGCGCTCGATGAGCTCCCTGAAAAGCAGCGCATCGTTTTTATAGGAAATGAGCTGGAAAACAAAACTTTACAGGAAATTGCCGATGCCAGCGGAGAACCGCTCAAAACGATCATCAGCCGGAAAGGGTACGCCGTCAGGCATCTCCGGGAGCGCTTATCGGCTTTGTATGGTGATTTCCTGGAGTAG
PROTEIN sequence
Length: 205
MRACSSACIYENDMNHSMTLSMPEKRSFSLPETVKKYGMQLLGFIRGRVKVVEDAEDILQDVWYQLGSLTDPEEIESISGWLYRVARNKITDRYRKQKNELLDDLFYDDEEGEFSFGDILLADDSNNPELSFFKEVFWKTFREALDELPEKQRIVFIGNELENKTLQEIADASGEPLKTIISRKGYAVRHLRERLSALYGDFLE*