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cn_combo_scaffold_1596_27

Organism: CN-SCN_Cytophagaceae_12x

partial RP 39 / 55 BSCG 38 / 51 ASCG 12 / 38
Location: comp(27472..28932)

Top 3 Functional Annotations

Value Algorithm Source
RagB/SusD family protein n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G4Q1_ECHVK similarity UNIREF
DB: UNIREF100
  • Identity: 53.5
  • Coverage: 488.0
  • Bit_score: 530
  • Evalue 1.30e-147
RagB/SusD family protein similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 488.0
  • Bit_score: 530
  • Evalue 3.70e-148
RagB/SusD family protein {ECO:0000313|EMBL:AGA79991.1}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola similarity UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 488.0
  • Bit_score: 530
  • Evalue 1.80e-147

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Taxonomy

Echinicola vietnamensis → Echinicola → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1461
ATGAAATTGATCAGAATAATAACACTCATTATAGCCGGAAATCTGCTCATCAGCTGTGAGCACTTTCTGGATGAACCCGTCTATTCCCAGCTGGCGCCGGAGAACCTGCTTTCTTCCGAAGAAGGTATCCGCAATGTCCTGTATTCGGCCTATGCGGAAGCCGCCAACATGGCGGGAGCGAACTCCAAAACCGAGCTTGCGATGGAAGAATGGCCGACAGACATCATGTGGCAGACCGGGGGAGGGGAAAACGCCACTGCAGTTCCTTTTATCAATTATTCCCTGGACCCGGGCATAGGCATACTCTACAGCACCCTGTGGGCGCCGTACTACAGGGCGATACGGAATGCCAACATCCTGCTCGATAACATAGACCTTGTCGATTCTCCGAAAAAGGAGCTGTTCAGGGCCGAAGCGCGATTCATCCGGGCGATTGCTTATATAAAGCTGTACACGGCATTCGGCCCGGTCCCTGTCCGGAAGAGCGATAACGACCCGGTCCAGGTACCCCGTCCTTCAAAAGAGGAGATAGAGCTGTTTATTGAAAACGAGCTGGTTGAGAGTGCGGCCAACCTGCCGGTCCCAGGTGCGGAAGAGGCCTACGGCCGGGCGCATACCGGGGCGGCCTTCGGCTACCTTTGCAAATTCTATCTCAATACAAAACAATGGCAGAAGGCAGCCGATGCAGCGCAAAAAGTAATAGATACAGGTTATTACGGCCTCCATGAGAGCTATTTCGACCTGTTCAGGATCGAGAACGAGCGCAACCGGGAATTTATCTGGGTCAAGCCCGCATTCCCGAGCGCCGACAGGGCGACTTCCAACGACTGGATGAACGGCGCGTTCCCCGTAGGGTTTGTCAAACATGAGAAAACCGGGCTGGAGTTCCGGAGCAACTGGGTGATCTTTGCGTCGGAATTCAGGCTGAGGGACAAGTTCTACCTTTCCTTCGAAGCGAACGACAAGCGGAAGGACCTGATCATTACGGAATTTATTAACGGCGCCGGGCAAACCGTGCGGCTCCTGGGAAACGACAATACGCGTTCGTTTAAATACTGGCCTGACCCGAACGCCGTTGCCCAGGCTCACGGGAACGATATTCCTACGCTGCGGTATTCCGACATCCTGCTGTCGAGGGCTGAAGCGCTTTGCGAGCTGAACGGCCCCAACCAGGAGTCGATAGACCTGATCAACCTGGTCAGGGCGAGGGCCGGTGTCGAAAGCCTGTCTCTCTCCGGCTTCCCCGATACCGGATCGCTCCGGGCTCATCTTTTACGGGAAAGAGGATGGGAATTCTATTCTGAAGGTAAAAGACGAGAGGACATGATCCGTATGGGCATGCTCATTACGGATGCCAACCAGAGAGGTATATCCAACGCGCAGCCGTTCCGGGAGCTCTTCCCGATACCGCAGCAGGCGATAGATTCGGATGCTCAGCTGGAGCAGAATACGGGTTATTGA
PROTEIN sequence
Length: 487
MKLIRIITLIIAGNLLISCEHFLDEPVYSQLAPENLLSSEEGIRNVLYSAYAEAANMAGANSKTELAMEEWPTDIMWQTGGGENATAVPFINYSLDPGIGILYSTLWAPYYRAIRNANILLDNIDLVDSPKKELFRAEARFIRAIAYIKLYTAFGPVPVRKSDNDPVQVPRPSKEEIELFIENELVESAANLPVPGAEEAYGRAHTGAAFGYLCKFYLNTKQWQKAADAAQKVIDTGYYGLHESYFDLFRIENERNREFIWVKPAFPSADRATSNDWMNGAFPVGFVKHEKTGLEFRSNWVIFASEFRLRDKFYLSFEANDKRKDLIITEFINGAGQTVRLLGNDNTRSFKYWPDPNAVAQAHGNDIPTLRYSDILLSRAEALCELNGPNQESIDLINLVRARAGVESLSLSGFPDTGSLRAHLLRERGWEFYSEGKRREDMIRMGMLITDANQRGISNAQPFRELFPIPQQAIDSDAQLEQNTGY*