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cn_combo_scaffold_2899_1

Organism: CN-SCN_Cytophagaceae_12x

partial RP 39 / 55 BSCG 38 / 51 ASCG 12 / 38
Location: 3..413

Top 3 Functional Annotations

Value Algorithm Source
ApbE family lipoprotein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EJL4_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 130.0
  • Bit_score: 134
  • Evalue 7.70e-29
ApbE family lipoprotein similarity KEGG
DB: KEGG
  • Identity: 51.5
  • Coverage: 130.0
  • Bit_score: 134
  • Evalue 2.20e-29
ApbE family lipoprotein {ECO:0000313|EMBL:AEI50838.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformi similarity UNIPROT
DB: UniProtKB
  • Identity: 51.5
  • Coverage: 130.0
  • Bit_score: 134
  • Evalue 1.10e-28

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Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 411
GGCGGGGACCTGGCTTTGTCTGCCCCTCCGCCGGGAGAAAAGGGATGGAAGATTTCGGTATCGTCAGGCACGGCGAATGAATCCGACGAAATAATTGTCGTATCCGATTGCGGGGTAGCCACTTCGGGAGTGACCTATCGCTACGTTGAGCACAAAGGGAAGAAATATGCACATATCGTAGATCCCCGGACGGGAGTAGGGCTGACCAGGGAGGTACGATCGACAATTATCGCTCCGACAGGCACGCGGGCCGATGCTTTGGCAACGGCGGTGAGCGTGCTGGTGATAAAAAAAAGCAGGCGGATCATGAAAAAGAAATTCCCGGAGGTCAGGGCATGGCTCCTGGAAAAAGCGATTGACACCGGGAAAACCAGGAGCTGGAGCACCCTGGAGACAGAAAAGCTCCGCTGA
PROTEIN sequence
Length: 137
GGDLALSAPPPGEKGWKISVSSGTANESDEIIVVSDCGVATSGVTYRYVEHKGKKYAHIVDPRTGVGLTREVRSTIIAPTGTRADALATAVSVLVIKKSRRIMKKKFPEVRAWLLEKAIDTGKTRSWSTLETEKLR*