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cn_combo_scaffold_16414_5

Organism: CN-SCN_Erythrobacter_10x

partial RP 5 / 55 MC: 1 BSCG 4 / 51 ASCG 2 / 38
Location: 2918..3400

Top 3 Functional Annotations

Value Algorithm Source
CopG family transcriptional regulator n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002F06B85 similarity UNIREF
DB: UNIREF100
  • Identity: 90.4
  • Coverage: 136.0
  • Bit_score: 238
  • Evalue 5.80e-60
Putative nickel-responsive regulator {ECO:0000256|HAMAP-Rule:MF_00476}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 156.0
  • Bit_score: 241
  • Evalue 9.60e-61
CopG family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 84.8
  • Coverage: 145.0
  • Bit_score: 236
  • Evalue 4.80e-60

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 483
ATGGTCCGCCCCATGAACGCCCCCGACACCCCCCGCCCCGAAGCATCCAAGCTGGCTCGCCTCAGCATGAGCCTTCCGGCCGAGCTGTTCCGCCAGCTCGACACCATGGTCGAGGAGCGCGCCCTGCCCTCGCGCTCGCAGCTCATCGCCGAACTGATCCGCCACGCGCTCGCCGAGCACGAGGCGCTGACCCGCCCCCACGCCATGCTCGCGGGGACCATCACCATCGTCTATGCCGGGAGCGGCGGGCGGGTGCGCCAGCAGCTTGCCGAGACGCAGTCCGATTACCTCAAGGAGGTGATCTCCTCGCAGCACGTCTTCCTCGAGCAGGACCAGTCGCTCGAGGTGCTGCTGGTGCAGGGCCCCGCCGTCAGGCTCAAGCAATTGTGCGACGCGCTGCGCGCCATCCGGGGCGTGCAGCAATTGCAGCTCGTCACCACCACCGCGCTGCTCCCGCCGCTCTACGAACAGGAGGGCACCTAG
PROTEIN sequence
Length: 161
MVRPMNAPDTPRPEASKLARLSMSLPAELFRQLDTMVEERALPSRSQLIAELIRHALAEHEALTRPHAMLAGTITIVYAGSGGRVRQQLAETQSDYLKEVISSQHVFLEQDQSLEVLLVQGPAVRLKQLCDALRAIRGVQQLQLVTTTALLPPLYEQEGT*