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cn_combo_scaffold_18017_5

Organism: CN-SCN_Erythrobacter_10x

partial RP 5 / 55 MC: 1 BSCG 4 / 51 ASCG 2 / 38
Location: 3590..4801

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase large subunit n=1 Tax=Novosphingobium sp. AP12 RepID=J3AMD4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 77.9
  • Coverage: 393.0
  • Bit_score: 622
  • Evalue 2.80e-175
3-isopropylmalate dehydratase {ECO:0000313|EMBL:KEO96743.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrob similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 395.0
  • Bit_score: 676
  • Evalue 2.30e-191
3-isopropylmalate dehydratase similarity KEGG
DB: KEGG
  • Identity: 72.4
  • Coverage: 399.0
  • Bit_score: 571
  • Evalue 2.10e-160

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Taxonomy

Erythrobacter litoralis → Erythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1212
ATGCCCCGCACCCTCTTCGACACGATCTGGGACGCGCACCGGGTGGCTACGCTCCACGGCGGCGCGGACCTCATCGCCATCGACCGGGTGTTCCTCCACGAGCGCACCGGCGCCGCCGCGCTCGCGCGCATGGCAGAGATGGGGCGCAAGTTGCGCGATCCGGCGCGGGTCTTCGCGGTGATGGACCACATCGTCGACACCCGACCGGGGCGCGGCGACGGGACGCTGATGCCCGGCGGCGAGGGCTTCATCACCGAGACGCGCGCGGCGTGCCGCGCTGCGGGCATCACCCTGTTCGACGTGAACGACGCAGAGCAGGGGATCGTCCACGTCATCTCGCCCGAGCAGGGCATCGTGCTTCCCGGCACGACGCTGGTCGCGCCCGACAGCCACACCTGCACGCAGGGCGCCTTCGGGGCGCTCGCCTGGGGGATCGGCTCGTCGGAGGCCGAGCACGCGATGGTGACGGGCACCCTCAGGATGGAGCGCCCGCGCGCGATGCGCGTGACCTTCGAAGGCGCGCTCCCGCCGGGCGTCACCGCCAAGGACATGATCCTCGCGCTCATCGCAGAGCACGGCGCGGGCGGCGGCGCGGGGCACGTGGTCGAGTTCGCCGGCGAGGCGGTGCGTGGCCTCGACATGGAAGCGCGCATGACGCTGTGCAACATGGCGACCGAGTTCAGCGCGGTAACGGGCCTGATCGCACCCGATGCCAAGACCTTCGCCTATCTCGCGGGGCGCCCCTATGCCCCCGCCGACTTCGCCGATCCCTATTGGCAGAGCCTCGCCAGCGACCCCGACGCGGCCTTCGACAGCGAGATCGCGATCGACGCCTCGGGGCTCGCCCCGATGGTAAGCTGGGGCACCAGCCCGGAGCACACCATTCCCGTCACCGCGCAGGTCCCGCAAGGCCCGGCGCGCGCGCACGACTATATCGGCTTGGCGCCGGGCACCCCGCTCGCCGGGACGCCGCTCGATGCGGCCTTCATCGGCTCATGCACCAACAGCCGCATCGCCGACCTCCGCCGCGCCGCCGCGATCCTCAAGGGCCGCCGCATCGCGCCCGCGATCCGCAAGGCGCTGGTGGTCCCGGGCTCCATGGCGGTCAGGCGGCAGGCCGAGGCCGAGGGGCTCGACAAGGTCTTCGAGGCGGCGGGCTTCGAGTGGCGCATGAGCGGCNCTTCGAGGCGGCGGGCTTCGAGTGGCGCATGA
PROTEIN sequence
Length: 404
MPRTLFDTIWDAHRVATLHGGADLIAIDRVFLHERTGAAALARMAEMGRKLRDPARVFAVMDHIVDTRPGRGDGTLMPGGEGFITETRAACRAAGITLFDVNDAEQGIVHVISPEQGIVLPGTTLVAPDSHTCTQGAFGALAWGIGSSEAEHAMVTGTLRMERPRAMRVTFEGALPPGVTAKDMILALIAEHGAGGGAGHVVEFAGEAVRGLDMEARMTLCNMATEFSAVTGLIAPDAKTFAYLAGRPYAPADFADPYWQSLASDPDAAFDSEIAIDASGLAPMVSWGTSPEHTIPVTAQVPQGPARAHDYIGLAPGTPLAGTPLDAAFIGSCTNSRIADLRRAAAILKGRRIAPAIRKALVVPGSMAVRRQAEAEGLDKVFEAAGFEWRMSGXSRRRASSGA*