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cn_combo_scaffold_18017_6

Organism: CN-SCN_Erythrobacter_10x

partial RP 5 / 55 MC: 1 BSCG 4 / 51 ASCG 2 / 38
Location: 4753..4992

Top 3 Functional Annotations

Value Algorithm Source
isopropylmalate isomerase large subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 82.9
  • Coverage: 76.0
  • Bit_score: 131
  • Evalue 1.10e-28
Isopropylmalate isomerase large subunit n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S010_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 82.9
  • Coverage: 76.0
  • Bit_score: 131
  • Evalue 3.80e-28
3-isopropylmalate dehydratase {ECO:0000313|EMBL:KEO96743.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrob similarity UNIPROT
DB: UniProtKB
  • Identity: 85.3
  • Coverage: 75.0
  • Bit_score: 135
  • Evalue 2.80e-29

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Taxonomy

Erythrobacter litoralis → Erythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 240
GTGGCGCATGAGCGGCNCTTCGAGGCGGCGGGCTTCGAGTGGCGCATGAGCGGCCGCTCGCTGTGCTTCTACGCGGGCGGCGAGGGCTTCGCGCAAGGGAGCCGCGTCATCTCCAGCACCAACCGCAATTTCGAGGGCCGCCAAGGCCCCGGCATCCGCACCCACATCGCCTCGCCCGAGACCGTTGCGGCGAGCGCCCTCGCGGGCGCCATCGCTGATCCGCGGGACTACGGAGCATGA
PROTEIN sequence
Length: 80
VAHERXFEAAGFEWRMSGRSLCFYAGGEGFAQGSRVISSTNRNFEGRQGPGIRTHIASPETVAASALAGAIADPRDYGA*