ggKbase home page

cn_combo_scaffold_3928_12

Organism: CN-SCN_Erythrobacter_10x

partial RP 5 / 55 MC: 1 BSCG 4 / 51 ASCG 2 / 38
Location: comp(8325..9590)

Top 3 Functional Annotations

Value Algorithm Source
transcription termination factor Rho n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002D977B3 similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 421.0
  • Bit_score: 807
  • Evalue 6.30e-231
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 94.3
  • Coverage: 421.0
  • Bit_score: 786
  • Evalue 3.30e-225
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47 similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 421.0
  • Bit_score: 797
  • Evalue 1.20e-227

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

BJP_08E140C01_10KDA_Sphingomonadales_62_47 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1266
ATGCATCTCAAGGACCTCAAGCAGAAAACCCCGGCCGAACTGGTCGCGATGGCCGAGGAACTCGGCGTCGAGGGCGCATCGACCATGCGCCGCCAGGACCTGCTCTTCAGCATCCTGCGCGAACTCGCCGAGGACGAGGAATACGAAGACAAGATCATGGGCATCGGCACCATCGAGGTGCTGCAGGACGGCTTCGGCTTCCTGCGCTCGCCCGAGGCGAACTACCTTGCCGGGCCGGACGACATCTATGTCTCGCCCAATCAGGTCAGGAAGTGGGGCCTGCGCACCGGCGACACGGTCGAGGGCGAAATCCGCGCCCCGCGCGATGGCGAGCGGTATTTCGCGCTCACCAGTCTCGCCAAGGTCAATTTCGACGATCCCGACGCGGTGCGCCTGCGCACCAATTTCGACAACCTCACCCCGCTCTATCCCGAAGAAAAGCTGTCGCTCGACACGCTCGATCCGACGGTCAAGGACAAGAGCGCGCGGGTGATCGACATCATCGCCCCGCAGGGCAAGGGCCAGCGCGCGCTGATCGTCGCGCCGCCGCGCACCGGCAAGACCGTGCTGCTCCAGAACATCGCCAAGGCGATCACCGACAACCATCCCGAGGTGTTCCTGATCGTCCTGCTGGTCGACGAACGCCCCGAGGAAGTCACCGACATGCAGCGCAGCGTGAAGGGCGAGGTCGTCTCCTCGACCTTCGACGAGCCCGCGCAGCGCCACGTGCAGGTCGCCGAAATGGTGATCGAAAAGGCCAAGCGCCTCGTCGAGCACAAGCACGACGTGGTGATCCTGCTCGATTCGATCACGCGTTTGGGCCGTGCCTACAACACCGTGGTGCCCTCCTCGGGAAAGGTGCTCACGGGCGGCGTCGACGCCAACGCATTGCAGCGCCCCAAGCGCTTCTTCGGCGCGGCGCGCAATATCGAGGACGGCGGCTCGCTCTCGATCATCGCCACCGCGCTGATCGACACCGGCAGCCGCATGGACGAGGTCATCTTCGAAGAGTTCAAGGGCACCGGCAACTCGGAAATCGTGCTCGACCGCAAGGTTTCGGACAAGCGCATCTTCCCGGCGCTCGATGTCGGCAAGTCCGGCACCCGCAAGGAGGAACTGCTGGTTGCCAAGGACAACCTCTCCAAGATGTGGGTGCTGCGCCGCATCCTGATGCAGATGGGCACCGTAGATGCAATGGAGTTCCTGCTCGACAAGATGAAGGATTCCAAGACCAACGAGGATTTCTTCGCTACGATGAACCAGTAG
PROTEIN sequence
Length: 422
MHLKDLKQKTPAELVAMAEELGVEGASTMRRQDLLFSILRELAEDEEYEDKIMGIGTIEVLQDGFGFLRSPEANYLAGPDDIYVSPNQVRKWGLRTGDTVEGEIRAPRDGERYFALTSLAKVNFDDPDAVRLRTNFDNLTPLYPEEKLSLDTLDPTVKDKSARVIDIIAPQGKGQRALIVAPPRTGKTVLLQNIAKAITDNHPEVFLIVLLVDERPEEVTDMQRSVKGEVVSSTFDEPAQRHVQVAEMVIEKAKRLVEHKHDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEDGGSLSIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVSDKRIFPALDVGKSGTRKEELLVAKDNLSKMWVLRRILMQMGTVDAMEFLLDKMKDSKTNEDFFATMNQ*