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cn_combo_scaffold_3928_17

Organism: CN-SCN_Erythrobacter_10x

partial RP 5 / 55 MC: 1 BSCG 4 / 51 ASCG 2 / 38
Location: 13044..13901

Top 3 Functional Annotations

Value Algorithm Source
shikimate dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 283.0
  • Bit_score: 399
  • Evalue 7.60e-109
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000314D346 similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 281.0
  • Bit_score: 454
  • Evalue 7.00e-125
Tax=BJP_IG2102_Porphyrobacter_62_18 similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 284.0
  • Bit_score: 475
  • Evalue 4.10e-131

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Taxonomy

BJP_IG2102_Porphyrobacter_62_18 → Porphyrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
ATGAGCAGACCCTACGCGGAAGTGATCGGCGATCCCGTCGCGCAGTCCAAGTCGCCCGCGATCCACACCTTCTGGCTCGGGAAACTCGGGATCGATGCCGAATATCGCGCCTGCCATGTCCGAGCCGACGATCTCGCGGACTACCTCGCCGCGCGCCGCAAGGACCCCGCCTGGCGCGGCTGCAACGTCACCATGCCGCACAAGCAGGCGGTGCTGCCGCTGCTGGGTCGCATCGATCCGCCCGCCGACACGATCCTTGCGGTCAACACCATCCTGCCCGATGGCGCGGGCGGGCTCATAGGCACCAACACCGATGCGGCGGGCTTCCTCGAACCGCTGGCGCAGGAGCTGGCGCAGACCCACTATTTCCGCATGGCGCGCATCATCGGCACGGGCGGCGCGGCGCGGGCGATCATTGCCGCGCTGGCGGGCCACGGCTTCACGCTGGTGGTCGCCGGGCGCGATCCCGGCAAGGCGCGCGCGCTGCTCGATGAACTCGCGCCCGAAGGCGAGCACCACACGCCCCCGCTCGCCCATTTCGCGGGAGGCACCGACTTCGCCTTCGACGACCGCGAAGGCTGCCTCGATCTCGTGGTCAACGCCTCGAGCCTCGGGATGAGCGGCCAGCCGCCGCTCGCCTTCGACTGGAGCCACGCGCCGCCGGGCAGCATCGCCTACGACATCGTCACCGCGCCGGTGGACACGCCCTTCCTCGCGGGCGCGCGGGCGCGGGGCCATCGCACCATCGACGGACTCGCCATGCTGATCGGGCAGGCTGCGGTCGCCTTCGGGCATTTCTTCGGCGCGCCGCCCCCGCGCGAACACGACGCCGAGCTGCGCGCGCGGCTGACGGCATGA
PROTEIN sequence
Length: 286
MSRPYAEVIGDPVAQSKSPAIHTFWLGKLGIDAEYRACHVRADDLADYLAARRKDPAWRGCNVTMPHKQAVLPLLGRIDPPADTILAVNTILPDGAGGLIGTNTDAAGFLEPLAQELAQTHYFRMARIIGTGGAARAIIAALAGHGFTLVVAGRDPGKARALLDELAPEGEHHTPPLAHFAGGTDFAFDDREGCLDLVVNASSLGMSGQPPLAFDWSHAPPGSIAYDIVTAPVDTPFLAGARARGHRTIDGLAMLIGQAAVAFGHFFGAPPPREHDAELRARLTA*