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cn_combo_scaffold_5941_8

Organism: CN-SCN_Erythrobacter_10x

partial RP 5 / 55 MC: 1 BSCG 4 / 51 ASCG 2 / 38
Location: comp(5472..5942)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase specialized sigma subunit n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NC87_ERYLH similarity UNIREF
DB: UNIREF100
  • Identity: 83.7
  • Coverage: 153.0
  • Bit_score: 256
  • Evalue 2.00e-65
DNA-directed RNA polymerase specialized sigma subunit similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 153.0
  • Bit_score: 257
  • Evalue 2.50e-66
DNA-directed RNA polymerase specialized sigma subunit {ECO:0000313|EMBL:ABC62704.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrob similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 153.0
  • Bit_score: 257
  • Evalue 1.30e-65

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Taxonomy

Erythrobacter litoralis → Erythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 471
GTGCTCGATCTGCTGCCGCGGCTGCGGCGGTTCGCGATCGGCCTCGCCGGGTCGAGGGCCGACGGTGACGACCTGTGCCAGATGACAATCGAACGCGCCCTCGCCCGCCGTGACCAATGGCAGGAGGGGACGCGGCTCGACAGCTGGATGTATCGGATCATGCGCAACATCTTCATCGACGAGGCGCGCGCCACATCGCGCCGCCGGGAGACCTTCGTGGACGCGGAGTCGGGGCTCGGCGTCGGCAGCGACGGGGCGCAAGAAGCCGCGGTCGAGCTGTCGCTGGTCGACCGCGCCATGGCCCGTCTCCCCGAAGAGCAGCGCGAGGCGGTGCTGCTGGTGATGGTGGAGGGCTGGTCCTACAAGGAGGCCGCCGAGATCGTGGGATGCCCGGTCGGCACCCTCAATTCACGTCTGGTGCGCGGACGCGATGCGCTGCTGGCGATGCTGGAGGACGGGCAATGCGCGTGA
PROTEIN sequence
Length: 157
VLDLLPRLRRFAIGLAGSRADGDDLCQMTIERALARRDQWQEGTRLDSWMYRIMRNIFIDEARATSRRRETFVDAESGLGVGSDGAQEAAVELSLVDRAMARLPEEQREAVLLVMVEGWSYKEAAEIVGCPVGTLNSRLVRGRDALLAMLEDGQCA*