ggKbase home page

cn_combo_scaffold_14684_1

Organism: CN-SCN_Erythrobacter_10x

partial RP 5 / 55 MC: 1 BSCG 4 / 51 ASCG 2 / 38
Location: comp(2..1579)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B45889 similarity UNIREF
DB: UNIREF100
  • Identity: 62.3
  • Coverage: 522.0
  • Bit_score: 621
  • Evalue 6.10e-175
TonB-dependent receptor {ECO:0000313|EMBL:EMD82724.1}; TaxID=1234595 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium JLT2015.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.5
  • Coverage: 512.0
  • Bit_score: 585
  • Evalue 8.90e-164
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 47.4
  • Coverage: 511.0
  • Bit_score: 438
  • Evalue 2.70e-120

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

alpha proteobacterium JLT2015 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1578
ATGCTTCACAAACCTCATTTCCGCGCCGCCGCGCTGCGGTGCGCATCGCTGATCGCCGTCTCCGCAGGGCTTGCCGCCGCGCTGCCCCAGGTCGCGCGCGCGCAGGACAATGCCGCGGCCGACACGCAGGGCGACTTCGGAGGCCAGATCGTCGTCACCGCGCAAAAGCGCGCCGAACTCGCGCGCGACGTGCCGATCACCGTCTCCGCGCTGCGCGGACGCGACCTCTTCACCATCGGGGTGGACGAGTTCGACGAGGTCGCCGCCTTCATCCCGGGCCTGATCGTGCAGGAGCAGAGCGTCAACAACCCCGGCTTCGTGATCCGCGGCATCACCTCGGATTCAGGCAGCGCGCAGATCGCGCCTCGCGTGACGATCTATTACAACGGGGTCGACGTGTCGCGCTCGCGCGGGTCCTATTTCGACCTCTTCGACATCGAGCAGATCGAGGTGGTGAAGGGCCCGCAGGCGACGCTGTTCGGCACCGCCGCGACGATCGGCGCGATTTCGGTGCGCACCGCGCGGCCCGTCCCCCGGCTCGAGGCCGCCGCCGCGGTCACGGTCGGCAATTTCAACGCGCGCCAGCTCAACCTCATGGTCAACAACGGCAACGACCAGGTCGCCGCGCGGCTTGCCGGGGTGTTCAAGAAGCGCGACGGCTTCATCGAGAACATCGCGGGCCGCCCCGGCACGGCGAGCCAGCGCATCGTCGGCATCGACCAGGACGACCTCAACGGCTTCGAGCAATACGGCATCCGCGGCTCGGTGCGGGTCTTCCCGGCGCCCGATGCGACCATCGACCTCGTGCTGAGCTACGAGAAGCAGAACAATCCCGGCACCGCCTTCGTCTCGGGGACGATCCCCAATTCGCAGGGCGGCACCAGCCCCTTCGGCCCGGCCGAGCTCGGCGGCTCGCCCTTCTCGCGCGAGGCGCTCGGCGCGCCGCGGCTCGGGATCGAGCGCGAGGTGGTGGACGCCAACCTCACCTTCGAATTCCCGCTCACCGACCGCCTGACGCTCACCAGCATCACCGGCTACCGCCAGTTCAACAGCCTCGAGATCTTCGACGCCGACGGCTCGGCGCTGTTCTATCTTGAGTTCGCCGAGGACGCGCGGGGCGACCAGTTCAGCCACGAGACGCGCGTCACCTTCACCGGCGAGCGCTTCCGCGGCTTCGCCGGGGCCAACTACTTCCGCGAGGACGGGACGCAGGCCGTGCCCTTCTCGACCGACGAGGGCACCTTCATCGCCTGCGGGCCCTTCGCCGCCTTCAACCCGCTGCGCCAGATCGTCGCGGGCGGCCTGAGGGTGCCGCTCAACCAGGTCTGCGCGGGGCCGAACGTGCTCGCCAACGCGAGCGCCGCCTCGACCATCCTCACCACCGCCCTGCCCGGGCCGACCCGCGGCGTGGTGCCCTATTCGAGCATCTTCACCAATGGCGGGATCAACTCGATCTTCTCGGCCTTCGTCGACGGCACCGTGGTGCTCGGCGACCTCGAACTGACCGCGGGCTTGCGCTACCTCACCGAAAGGCGCGAGAGCACCTATTTCGCGCGCCAGCCGGCGAGCGCGATCTTT
PROTEIN sequence
Length: 526
MLHKPHFRAAALRCASLIAVSAGLAAALPQVARAQDNAAADTQGDFGGQIVVTAQKRAELARDVPITVSALRGRDLFTIGVDEFDEVAAFIPGLIVQEQSVNNPGFVIRGITSDSGSAQIAPRVTIYYNGVDVSRSRGSYFDLFDIEQIEVVKGPQATLFGTAATIGAISVRTARPVPRLEAAAAVTVGNFNARQLNLMVNNGNDQVAARLAGVFKKRDGFIENIAGRPGTASQRIVGIDQDDLNGFEQYGIRGSVRVFPAPDATIDLVLSYEKQNNPGTAFVSGTIPNSQGGTSPFGPAELGGSPFSREALGAPRLGIEREVVDANLTFEFPLTDRLTLTSITGYRQFNSLEIFDADGSALFYLEFAEDARGDQFSHETRVTFTGERFRGFAGANYFREDGTQAVPFSTDEGTFIACGPFAAFNPLRQIVAGGLRVPLNQVCAGPNVLANASAASTILTTALPGPTRGVVPYSSIFTNGGINSIFSAFVDGTVVLGDLELTAGLRYLTERRESTYFARQPASAIF