Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-) | similarity |
KEGG
DB: KEGG |
34.7 | 320.0 | 186 | 8.60e-45 | hpk:Hprae_0732 |
Pseudouridine synthase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y836_9FIRM (db=UNIREF evalue=2.0e-39 bit_score=166.0 identity=34.29 coverage=76.3803680981595) | similarity |
UNIREF
DB: UNIREF |
34.29 | 76.38 | 166 | 2.00e-39 | hpk:Hprae_0732 |
seg (db=Seg db_id=seg from=33 to=46) | iprscan |
interpro
DB: Seg |
null | null | null | null | hpk:Hprae_0732 |
seg (db=Seg db_id=seg from=17 to=30) | iprscan |
interpro
DB: Seg |
null | null | null | null | hpk:Hprae_0732 |
PSI_RLU (db=PatternScan db_id=PS01129 from=148 to=162 evalue=0.0 interpro_id=IPR006224 interpro_description=Pseudouridine synthase, RluC/RluD, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: PatternScan |
null | null | null | 0.0 | hpk:Hprae_0732 |
rluA_subfam: pseudouridine synthase, RluA (db=HMMTigr db_id=TIGR00005 from=8 to=325 evalue=1.1e-56 interpro_id=IPR006225 interpro_description=Pseudouridine synthase, RluC/RluD GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 1.10e-56 | hpk:Hprae_0732 |
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=85 to=323 evalue=5.8e-50 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: superfamily |
null | null | null | 5.80e-50 | hpk:Hprae_0732 |
RIBOSOMAL PSEUDOURIDINE SYNTHASE (db=HMMPanther db_id=PTHR10436 from=3 to=325 evalue=4.8e-49) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 4.80e-49 | hpk:Hprae_0732 |
PseudoU_synth_2 (db=HMMPfam db_id=PF00849 from=102 to=261 evalue=7.8e-27 interpro_id=IPR006145 interpro_description=Pseudouridine synthase, RsuA and RluB/C/D/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 7.80e-27 | hpk:Hprae_0732 |
Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=12 to=61 evalue=1.6e-06) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.60e-06 | hpk:Hprae_0732 |
S4 (db=HMMPfam db_id=PF01479 from=13 to=58 evalue=1.5e-05 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.50e-05 | hpk:Hprae_0732 |
S4 (db=ProfileScan db_id=PS50889 from=13 to=101 evalue=11.114 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.11e+01 | hpk:Hprae_0732 |
Pseudouridine synthase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y836_9FIRM Tax=ACD49 |
UNIPROT
DB: UniProtKB |
98.2 | 325.0 | 605 | 3.90e-170 | ggdbv1_69255 |