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cn_combo_scaffold_153_24

Organism: CN-SCN_Gemmatimonadetes_22x

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(24252..25745)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U9_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 497.0
  • Bit_score: 711
  • Evalue 4.30e-202
RNA polymerase sigma-54 factor, RpoN similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 500.0
  • Bit_score: 764
  • Evalue 2.00e-218
RNA polymerase sigma-54 factor, RpoN {ECO:0000313|EMBL:AHG90787.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 500.0
  • Bit_score: 764
  • Evalue 1.00e-217

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1494
ATGAAGACGGGGCTCAGCCAGAGCACGTCGCTCCGGCAGGAGCTGAAGGTCAATCCACGCCTGTACCAGGCGATGGACCTGCTCTACATGCCGCTGCTCGACCTCCAGCAGCACCTCAAGCAGGAACTCCTCAACAACCCGTTCCTCGAGATGACCGAGCCCGACGAGGACGACTCGGAGGAGGAGGAGCGCGAGGGCGAGGAGGGGCCGGTCGACCTGGCGGAACCGGAGACCGCGCCGCCGGAGGAGCGGGAGTCGGTCAACAACGAGACGATCGACTGGGAAGAGATCCTGCTCGACGGCTTCGAGACCGGCGGGGTGCGCGAGGAGCACGAGGAGCGCGAGTACTACGAGCCCGTCTCGGTGGAGCGGCGCGACCTCGACGACCACCTCAAGGACCAGATCTCCCTCCTCGAGCTGACCCCGCGCCAGTTGCTGCTGGCGGACGAGTTCGCGGGCAACATCAACGAGGACGGCTACCTCACCTGCGCGATCGACGAGATCCTCGACGGCATCAACGAGGTGGTCGCCCGCGCGGCCGAGCGCGAGGGGTTCGAGGGCACGCTCCCGCTGTACACCCCGGCCGAGGCCGAGGAGATGCTGCGCATCGTCCAGACGCTCGACCCGCCCGGGGTCGGGGCGCGCGACCTCCGCGAGTGCCTCCTCTTGCAGCTGCGCGACCTCCAGCAGGAGGGGACGCTGCAGTTTCGCCTCGTGCACGACGCCTTCGACGAGCTCATCGCCCACCGCTGGAGCGAGATCTCGAAGCGCTTCGGCATCAGCGCCCAGGACGTGCAGCACGCCGCCGACGAGATCGCCAAGCTCGACCCCAAGCCGGGATTGCGCTACAGCGTCGCCAACGACGGCTACATCGTCCCGGACCTCGTCGTGGAGAAGATCGACGGCGAGTACCACGTCTTCATCAACGACGCCAACCTCCCGCGCCTCCGGCTCAGCAAGGCGTACCAGGACATCGCGCGTGACAAGAAGAAGTTCGACGGCGAGAACAAGGAGTTCATTTCCTCCAAGCTCAACTCGGCCAACTGGATGATCCAGGCGATCGAGCAGCGCCGCCAGACGATGCTCAAGGTCATGAACTACATCGTCGACCGGCAGCGCGACTTCTTCGAGAAAGGGGTGCAGTACCTCAAGCCCCTCACCCTGCGCGAGGTGGCCGAGGTGATCTCCATGCACGAGAGCACCGTCAGCCGCGTCACGAACGAGAAGTACGTGCAGACGCCGCGCGGCGTCCTCCCCCTCAAGTTCTTCTTCTCGTCCGGGCTGAGCACCACCGGGGGCGAGGACGTGTCGGCGCGCGGCATCAAGGACCAGATCGAGAAGCTGGTCGCCAGCGAGGACGCACGGAATCCGCTCACCGACCAGGCCATCGTGAACATCCTGCGCGAGAACGGCGTCAACATTGCACGGCGCACCGTCGCCAAGTACCGCGACCAGCTGGGGGTGCTCTCCGCGCGCATGCGCAAGCGGGTATGA
PROTEIN sequence
Length: 498
MKTGLSQSTSLRQELKVNPRLYQAMDLLYMPLLDLQQHLKQELLNNPFLEMTEPDEDDSEEEEREGEEGPVDLAEPETAPPEERESVNNETIDWEEILLDGFETGGVREEHEEREYYEPVSVERRDLDDHLKDQISLLELTPRQLLLADEFAGNINEDGYLTCAIDEILDGINEVVARAAEREGFEGTLPLYTPAEAEEMLRIVQTLDPPGVGARDLRECLLLQLRDLQQEGTLQFRLVHDAFDELIAHRWSEISKRFGISAQDVQHAADEIAKLDPKPGLRYSVANDGYIVPDLVVEKIDGEYHVFINDANLPRLRLSKAYQDIARDKKKFDGENKEFISSKLNSANWMIQAIEQRRQTMLKVMNYIVDRQRDFFEKGVQYLKPLTLREVAEVISMHESTVSRVTNEKYVQTPRGVLPLKFFFSSGLSTTGGEDVSARGIKDQIEKLVASEDARNPLTDQAIVNILRENGVNIARRTVAKYRDQLGVLSARMRKRV*